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PLM1_100_coex_sep16_scaffold_3404_2

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3332..3952)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 197.0
  • Bit_score: 342
  • Evalue 6.10e-92
DNA-directed RNA polymerase subunit beta bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 206.0
  • Bit_score: 388
  • Evalue 3.40e-105
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 206.0
  • Bit_score: 401
  • Evalue 7.10e-109

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 621
CCGGACGGCACTCCGGTCGAAATCGTCCTGAACCCTCTGGGTGTGCCCTCTCGCATGAACGTCGGCCAAATCTTGGAGACGCATCTGGGCTGGGCGGCCCGCGCGCTCGGCCTGTGGGTGGCCAGCCCGGTGTTCGACGGCGCCACCGAGCAGGAGATCAAGGAGCACCTCAAGCAGGCCGGGATGCCGACGTCGGGCAAGACCAGGCTCTACGACGGCCGCACCGGCAAGCCGTTCCACCAGGAGGTCACCGTCGGCCAGATCTACATCTTGAAATTGGCGCACCTCGTGGACGACAAGATGCACGCGCGCTCGATCGGGCCCTACTCGCTGGTCACCCAGCAGCCGCTCGGCGGCAAGGCCCAGTTCGGCGGGCAGCGGTTCGGCGAGATGGAGGTGTGGGCGCTGGAAGCCTACGGCGCCGCCCACACGCTCCAGGAGATGCTGACCGTGAAGTCCGACGACGTCGAGGGCCGCAACCGGATCTACGAGGCGATCGTGAAGGGCGAGAACTTCCTCGAGCCCGGCACGCCGGAGTCCTTCAACGTACTCGTGAAGGAGCTGCAGAGCCTGGCCCTGGACGTCGAGCTGATCACCAAGAACGGAAAGAAGACGTCGTGA
PROTEIN sequence
Length: 207
PDGTPVEIVLNPLGVPSRMNVGQILETHLGWAARALGLWVASPVFDGATEQEIKEHLKQAGMPTSGKTRLYDGRTGKPFHQEVTVGQIYILKLAHLVDDKMHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEMLTVKSDDVEGRNRIYEAIVKGENFLEPGTPESFNVLVKELQSLALDVELITKNGKKTS*