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PLM1_100_coex_sep16_scaffold_3726_5

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 3453..3770

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor bin=GWA2_Methylomirabilis_73_35 species=Selenomonas noxia genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 106.0
  • Bit_score: 161
  • Evalue 3.50e-37
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 106.0
  • Bit_score: 137
  • Evalue 2.00e-30
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 106.0
  • Bit_score: 165
  • Evalue 2.60e-38

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 318
GTGCAGATCGCCCGTCGCTACGTCAATCGCGGACTGGCGCTGCCGGATCTGATCGAGGAGGGCAATCTCGGCCTGCTGCACGCCGTCGACAAGTTCGAGCCCGAGCGCGGCACGCGCTTCGCGACGTACGGGACGTGGTGGATCCGGCAGGCGGTGGCGCGGGCGCTGGCCAACCAGGCACGCATCATCCGGCTGCCGGTGCACGTCGAGACGCTGCTCGGCCGCTACAAGCGCGAGCACACCCGCCTCACCCAGACGCTGGGCCGGGCGCCGACCGCGAGCGAGCTGGCCCAGGCGATGGGCGCCAGCGAAGAGCAG
PROTEIN sequence
Length: 106
VQIARRYVNRGLALPDLIEEGNLGLLHAVDKFEPERGTRFATYGTWWIRQAVARALANQARIIRLPVHVETLLGRYKREHTRLTQTLGRAPTASELAQAMGASEEQ