ggKbase home page

PLM1_100_coex_sep16_scaffold_4306_1

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1..786

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS_1 bin=GWC2_Methylomirabilis_70_16 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 260.0
  • Bit_score: 250
  • Evalue 1.40e-63
major facilitator superfamily transporter similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 249.0
  • Bit_score: 154
  • Evalue 2.30e-35
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 256.0
  • Bit_score: 298
  • Evalue 6.30e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 786
GCCGCGAGCTTCCTCGTGGCCGACGTGCTGGACCGGGTGCCGGCGCCGACCAGCTACGGGATCTGCTTTCTCGCCGCCTCGGCGTGCCTGGCGCTGTCATGGGTCGCGCTGGCCTTCGTCCGCGAGCCCGAGGGCCGGGCCACCCGCGCGCCCGTGCTGCTGCGCGCCTACCTGGCGCGCGTGCCCGGCCTGCTGCGGCGCGACCGCAACCTCTCCCGATTCCTCGCCACCCGCGCCTTCGCGATCGCCGGCGTGATGGGCAGCGGGTTCTACACCGTCTATGCGCTGCGCGCCTGGGAGGCGCCGCCGGGGCAGGCCGGCGTGTTCACCGCGCTGCTGGTCGTCGGCCACGCGCTCGGCACGCTCACGCTCGGCTGGGTCGCCGACCACGCCGGTCACCGCCTCGTCCTGCTGGCGGGCGCGAGCGCGACGGTGGCCGCCAACGTCGTGGCGCTGCTGGCCGGAAGCCTCGGCGCGTTCGAGGCGGTCTTCGTGCTCTCCGGGATCCACACCGCCGCGGTGAACGTGTCGGCGTTCAACGTGCTGCTCGAGTTCGCCCCCACGCCGGACGAGCGGCCCACGTACATCGGGCTCGGCTCCACGTCGATGGCGCCGGTGGCATTCGCCACGCCGCTGATCGCCGGACTGATGGCCGACGGGCTCGGCTTCGGCGCGGTTTTCGTCGTCTCCCTCGTGGCCAGCCTCGTGGGCCTGGTGATGCTGGCCACGCTGGTGCACGACCCGCGACGCGTCGTCGCCCGCCCGGCGGAGGAGGTGGCGGTGTGA
PROTEIN sequence
Length: 262
AASFLVADVLDRVPAPTSYGICFLAASACLALSWVALAFVREPEGRATRAPVLLRAYLARVPGLLRRDRNLSRFLATRAFAIAGVMGSGFYTVYALRAWEAPPGQAGVFTALLVVGHALGTLTLGWVADHAGHRLVLLAGASATVAANVVALLAGSLGAFEAVFVLSGIHTAAVNVSAFNVLLEFAPTPDERPTYIGLGSTSMAPVAFATPLIAGLMADGLGFGAVFVVSLVASLVGLVMLATLVHDPRRVVARPAEEVAV*