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PLM1_100_coex_sep16_scaffold_4306_4

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1778..2128)

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 112.0
  • Bit_score: 103
  • Evalue 1.20e-19
rbpA; putative RNA-binding protein rbpA similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 70.0
  • Bit_score: 85
  • Evalue 7.50e-15
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 107.0
  • Bit_score: 107
  • Evalue 1.20e-20

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGTCGGTGAGGCTGTTCGTGGGAGGCTTGGCGTTCTCCACCGCGACCGACGGGCTGCGCGATGCCTTCGCCCGCTTCGGCATCGTCCAGTCGGCGGCGGTCATGACCGACCGGGAGACCGGCCGATCGCGCGGGTTCGGATTCGTGGAGATGGCCAACGACCAGGAGGCCGAGAAAGCGATCAGCAGCCTGAACGGTTCGAGCCTGGACGCCCCGGACTGGCGGCGGTGGTGGCGGTGGCTACGGACCCCGGCCGGGTGGCGGGGGCGGCGGCTTCGCCCCGAGGCCAGGAGCCGGTGGTTGGACGCCCCCGGCGCCGGAGGGACGCACCGGCAACCGCGGGCGCGGTGA
PROTEIN sequence
Length: 117
MSVRLFVGGLAFSTATDGLRDAFARFGIVQSAAVMTDRETGRSRGFGFVEMANDQEAEKAISSLNGSSLDAPDWRRWWRWLRTPAGWRGRRLRPEARSRWLDAPGAGGTHRQPRAR*