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PLM1_100_coex_sep16_scaffold_5012_5

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 5563..6888

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma54 specific transcriptional regulator Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGJ4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 432.0
  • Bit_score: 299
  • Evalue 3.40e-78
sensory box-containing sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 434.0
  • Bit_score: 293
  • Evalue 6.90e-77
Tax=RBG_13_Nitrospirae_41_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 426.0
  • Bit_score: 305
  • Evalue 8.70e-80

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Taxonomy

RBG_13_Nitrospirae_41_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1326
GTGCTGTCGACGCATGGCGAAATTCTTCGGGTCAACGAGGCGGCCACGTATCTCCTCGGCGTGCGGCGGGAAGAGCTCGTGGGCCGGTTCGTGGCCGACCGCGACTTGGGCCTGAACATCGACGGGGCCTGGGTGCTGGATGCGCTTTCCAGCCAAGTTGCCGTGAGCCGGGCGCTCGACCTGCGCGGCGGTCGCAAGACAATCGTGACGCTGCACGCCCGGCGCGGCGCCGACGGGCAGCCGCAATACCTGATCCTCGCCGTGCGCGACGTGACCGGCATCAGTCAGCTCGTCAGCCGCGTGCAGACCGCTGCGCTCACGAGTGCAGCCCGATGGTGGCAGATGCGGCGCAGCGAGGTCGGCATCGACCGTATCGTGACGGAGAGCCGCGCGATGCGCGCGGTCGCCGAGAAAGCGCTGCAGTTCGCGCACGTCGACTCGCCGGTGCTGATCGTGGGCGAGACCGGCACCGGAAAGACGCTCTTCTCGCGGATCATCCACCAGGCCTCCGGCCGGGCGGGCGCGTCGCTGCGCGAGGTGAACTGCGGCGCCATTCCGGCCGGGCTCATGGAGAGCGAGCTGTTCGGCTATGCGCGCGGGGCCTTCACGGGCGCCGATGCGAAGGGCCGAACCGGGCTGGTGGAGCTCGCCAACGAAGGCACGCTGCTCCTGGACGAGATCGGCGACATGCCACTGCTGCTGCAAGTGAAGCTGCTGCAATTCGTGGAGGCGGGCGAGGTGTGGCCGGTCGGCGCGTCGAAGCCGAAGCGGGTCAACGTCCGGGTGATCGCCGCGACGAACGCCGACCTGACCGACCTGGTGGCGCAGGGGGCATTCCGTCGCGACCTGTTCTACCGTCTGAACGTTCTGGTGCTGCAGGTGCCGCCGCTCCGGGAGCACCCGGAGGACGTCCCGGCCCTCGTCGAGATGATGGTCGACACGCTGCAGAGCCGTACCGGCAAGCGGCTGAAGCTGGCGCCCGACACACTCGAGCTACTCGCGCGCTATTCGTTTCCCGGCAACATCCGGGAGCTCTGGAACATCGTCGAGCGGCTGGCCGTCTCATGCCGGAGCGGGGTCGTTGGCGTGTCCGACCTGCCGACCGAGATCACGCAGGCCGCCCTATCGAAGGGCGTTCCGGAGAGTCCCACGAACCTGCGCCAGGTGCTCCGGAAGGTCGAGGCTGGCATCGTTCGCGAGGCGCTGCAGCGATACGGCAGCCAGACGAAGGCCGCCAAGCACCTCGGCGTCGGCCAGGCGACGATCGCCCGCAAGGCGCGCTTGCTCGACGTCTCCGACGAGCCGCGCTCATCCGTTTCTGAATAG
PROTEIN sequence
Length: 442
VLSTHGEILRVNEAATYLLGVRREELVGRFVADRDLGLNIDGAWVLDALSSQVAVSRALDLRGGRKTIVTLHARRGADGQPQYLILAVRDVTGISQLVSRVQTAALTSAARWWQMRRSEVGIDRIVTESRAMRAVAEKALQFAHVDSPVLIVGETGTGKTLFSRIIHQASGRAGASLREVNCGAIPAGLMESELFGYARGAFTGADAKGRTGLVELANEGTLLLDEIGDMPLLLQVKLLQFVEAGEVWPVGASKPKRVNVRVIAATNADLTDLVAQGAFRRDLFYRLNVLVLQVPPLREHPEDVPALVEMMVDTLQSRTGKRLKLAPDTLELLARYSFPGNIRELWNIVERLAVSCRSGVVGVSDLPTEITQAALSKGVPESPTNLRQVLRKVEAGIVREALQRYGSQTKAAKHLGVGQATIARKARLLDVSDEPRSSVSE*