ggKbase home page

PLM1_100_coex_sep16_scaffold_3895_3

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1049..1996)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport system inner membrane component bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 317.0
  • Bit_score: 524
  • Evalue 4.70e-146
sugar ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 334.0
  • Bit_score: 253
  • Evalue 5.70e-65
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 317.0
  • Bit_score: 524
  • Evalue 6.50e-146

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 948
GTGGCCGTACCGGCGGCGGAGCTGCGCAGCAAGGTAGTCGTCAGCGGCAGCGGGACGGCCGGGCTCAGGCGCGTGCTGGGGCCCGACTACCGCATGGGCTATCTCTTCGTCCTGCCCATCGCGATCTGCGTTCTTTCACTGGTCGCCTATCCGTTCTGCTACGCGATCTACCTGTCCATGACCCACAAGCTGGTCGGCATGCCGCCCATCTTCGTCGGCTTCGAGAACTACATCCGGCTGACGTGGGACGGGTTCTTCCAGCGCGCCGTCGTCAACAGCTTCATCTTCACGTTCGGCTCGGTGATCTTCAAGCTCGGCCTCGGGGTGGTGATGGCGCTGGTCCTCACCTCGCGCATCCGCTGGCGCTCGTTCTGGACGGGCGTGCTGCTGGTTCCGTGGGTGGCGCCCACCGTCGTCTCGGCGCTGAACTTCCTGTGGATGTTCGACGGCAGTCTCGGCGTGCTGAACTACTTGCTGGTGCGCGTCTTCCGCATCCTGCCCCAGGGCGTGGGCTGGCTGAGCGAGCCGGGAACGGCCATGGCCTCGGTCGTCGCCGTGAACGTCTGGCGCGGCTTCCCGTTCTTCGGCATCTCGTTCCTGGCCGGCATGAAGGCGATCCCGGGCGAGCTCTACGAGGCCGCCGCCGTGGACGGCGCCAACCCGCTGCAGCGCTTCCGCCACATCACGCTGCCCGGCATCCGCAACATCATGATCATCGTGGTGCTGCTGTCCACGATCTGGACGTTCAACGACTTCCAGATCATCTACATCCTCACCAAGGGCGGGCCGGGCGGCACGACGATGGTCATGCCGGTGTTCACGTACGAGACCGCGTTCGGCGCCCAGCGGCTGGGCGAGGCCATCGCGGTGGCGCTCTACCTGCTGCCGGTGCTGGCAGTGACGATCATGGTGCTGGCCCGGTACATGCGGCAGGGGCGCCGGCGGTGA
PROTEIN sequence
Length: 316
VAVPAAELRSKVVVSGSGTAGLRRVLGPDYRMGYLFVLPIAICVLSLVAYPFCYAIYLSMTHKLVGMPPIFVGFENYIRLTWDGFFQRAVVNSFIFTFGSVIFKLGLGVVMALVLTSRIRWRSFWTGVLLVPWVAPTVVSALNFLWMFDGSLGVLNYLLVRVFRILPQGVGWLSEPGTAMASVVAVNVWRGFPFFGISFLAGMKAIPGELYEAAAVDGANPLQRFRHITLPGIRNIMIIVVLLSTIWTFNDFQIIYILTKGGPGGTTMVMPVFTYETAFGAQRLGEAIAVALYLLPVLAVTIMVLARYMRQGRRR*