ggKbase home page

PLM1_100_coex_sep16_scaffold_4023_5

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2770..3489)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) bin=GWA2_Methylomirabilis_73_35 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 237.0
  • Bit_score: 380
  • Evalue 6.30e-103
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 236.0
  • Bit_score: 253
  • Evalue 5.60e-65
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 238.0
  • Bit_score: 387
  • Evalue 1.20e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 720
GTGACGGGCGCGACGCTGCTGGCGGCGGAGTCGCTCACGGCCGGCTATGGCCGGATGGACATCCTGCACGACCTCTCGCTCACCGTCGACGTGAACGAGATCGTCAGCATCATCGGCCCCAACGGCGCCGGCAAGTCCACCGCGTTCAAGACCATCGTCGGGTTCCTGCGGCCGCGGGCCGGCCGCGTCCTGTTCAACGGCGAGGAGATCACCGGGCTCCGCCCCGACCTCGTGCTGCGCCGCGGGCTGGCCTACGTGCCGCAGGGACGGATCGTGTTTCCGCAGATGACGGTGCTCGAGAATCTGGAGATGGGCGCCTACATCGAGCGCGACCCGGCCCGCGTCGCCGCCGCGCTCGAGCAGGTCTATGCGCTGTTTCCGATCCTCGCCGAGCGCCGCAAGCAGAACGCCGGGACCATGTCGGGCGGTGAGCAGCAGATGGTGGCCATCGCGCGCGCCCTCATGACCACGCCCCGGCTCATCCTGCTCGACGAGCCGTCGCTGGGGCTGTCGCCCAGGTTCGTCACGCTGATCTTCGAGAAGCTGATCGCCCTGCGGCAGGCCGGCTACACGCTGATGCTGGTCGAGCAGAACGCGACGCGCGCGCTGGCCGTCGCCGACCGTGCCTACGTGCTGGAGCTCGGCCGCAACCGCTTCGAGGGCCCCGGCCCGCGCCTGCTCGCCGACCCCGAGGTCAAGCGCCTCTACCTCGGCGGCTGA
PROTEIN sequence
Length: 240
VTGATLLAAESLTAGYGRMDILHDLSLTVDVNEIVSIIGPNGAGKSTAFKTIVGFLRPRAGRVLFNGEEITGLRPDLVLRRGLAYVPQGRIVFPQMTVLENLEMGAYIERDPARVAAALEQVYALFPILAERRKQNAGTMSGGEQQMVAIARALMTTPRLILLDEPSLGLSPRFVTLIFEKLIALRQAGYTLMLVEQNATRALAVADRAYVLELGRNRFEGPGPRLLADPEVKRLYLGG*