ggKbase home page

PLM1_100_coex_sep16_scaffold_4676_2

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1069..1974

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 199.0
  • Bit_score: 147
  • Evalue 1.50e-32
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 207.0
  • Bit_score: 95
  • Evalue 1.90e-17
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 203.0
  • Bit_score: 139
  • Evalue 5.70e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 906
GTGAGAAGGGTGCCAGCGACCACAAACAACGCACAGTCACTGTTGCGTGTAGACCACGTCATTCTCGCTGTCTTGATTGTCCTGCTGACGGCTGGCGTGGCCCCGGCCGCCGACCCGATCCGGGTCGGCTTCCTTGCGCCGATGAGCGGGATCTTCGCCCAGGCCGGCAAGGACATGCTCGACGGGCTGAAGATGGGGCTCGAGCAGGGGGGCGGCCAGGTGGCCGGGCGCAAGATCGAGCTGATCGAGGAGGACGACGAAGGCAACCCGGCCACGGCGCAGGCCAAGTACAGGCAGCTCGTCCAGCAGGACAAGGTCCACGTGCTCACCGGCGTCCTGCTCGCGAACATCAGCTACGCGCTGGTGCCGCCCATCGAGCGCGACGAGCTGCCCTCGCTCTTCCTCACCACGCCCGACGACCTCACCACGCGCCGACCGCCGAAGTGGATCCTCTGCTCCAACTTCGCGGCCAGCCAGCCCATGCACGCGCTCGGCGACAAGGTTAGCGGCCGCCTGCAGAACACCGTCATCCACACCTACCCGATGGTCGCGCAGTTCTGGACGTACAAGCCGGAGGAGTTCCTGAAGACACCGGCCTACGACCGGCCCGGTGGTTGGCGGCCTCACCCTCGTGTTCGTCGCGTTCCTGGTCGGTGCCATTGCAGCCGGCAGGCGATGGGCACTCGTTCTCTCCATCGTCCTGTTTGTCGTGGGTCTGCCTGCACCCCTTGCGTTTCTGAAGGAGTACGGTCCGGGCGGTCTACTCGTGTTTGTCGGCCAGACCCTGGCGAGTGGCGCCGCCTACGTCCTCTTGTGCACGAAGGCCTCCCGCCAGTGGTTCCGGGCCGCCCGAGAGTTCCGGAGACGGAAGGCCGAGAAACCCGGCGGCCGGCAGGTTTGATCTAG
PROTEIN sequence
Length: 302
VRRVPATTNNAQSLLRVDHVILAVLIVLLTAGVAPAADPIRVGFLAPMSGIFAQAGKDMLDGLKMGLEQGGGQVAGRKIELIEEDDEGNPATAQAKYRQLVQQDKVHVLTGVLLANISYALVPPIERDELPSLFLTTPDDLTTRRPPKWILCSNFAASQPMHALGDKVSGRLQNTVIHTYPMVAQFWTYKPEEFLKTPAYDRPGGWRPHPRVRRVPGRCHCSRQAMGTRSLHRPVCRGSACTPCVSEGVRSGRSTRVCRPDPGEWRRLRPLVHEGLPPVVPGRPRVPETEGRETRRPAGLI*