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PLM1_100_coex_sep16_scaffold_6326_2

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 298..1476

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor Tax=Hydrogenophaga sp. PBC RepID=I4MJW8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 34.6
  • Coverage: 387.0
  • Bit_score: 176
  • Evalue 3.00e-41
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EIK89508.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.6
  • Coverage: 387.0
  • Bit_score: 176
  • Evalue 4.20e-41
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 383.0
  • Bit_score: 166
  • Evalue 1.10e-38

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGAGGCGCTCGCTGCTTGCCCTCGCCGTCCTCGTGGCGCTCGCCGTGGTCAGCGCCGGCGCGCCGGATTCCGCTCACGCGCAGAAGGCGTTCAAGATCGCCGCCATCGTCCCCGTCTCGGGGCCGGCGGCCGCCTTCGGCCTCGGCTGCCAGCGCGGCCTCGAGATGGCCGCCGAAGACATCGGCGTCTTCACCGTGGCCGGTGAGAAGTACAAGGTCGAGATAGTCACGTACGACACGGTGTACGCGCCGGACAAGACGGTCGCCGCGATCAACCGCGCCGTCTACAACGATAACGTGAAGTACAGCGTGATCATCGGCGCCGGCGTGCACCCGCCGATCCTGCCGATCATCCGCGAGACCGGGTTCCTCGACTTCGCCTTCGCCGCCGCCGGCAAGCAGGTCACGAACCCGGAGAACCCGACGGTGTTCCGCATCATGGCGTCGTCGGACCAGCTCTACCAGACGTACGCCGTCGCCATCGCCGAGAAGCTCGGCGCCAAGCGCATCGCGTTCCTCGGCCCGAACGACGAGCTCGGCAAGAACGACGCGAAGGCGATCAAGGCCGAGACCGAGAAGATGAAAGCGAAGGGCGTGTCGTTCGTGGGCGATGAGTACTACGAACGCGGCGCCCGCGACTTCGGGCCGGCGCTGCTGCGCCTGATCGCGCAGAAGCCTGACATCATCGACACCGACGGCTCGCCCACGGGCTCGATCGCGCTCATCGCGAAGCAGGCGCGCGAGCTCGGCTACAACGGCTACTTCGTCAACACCACGGCCGTGCTCGAAGCCAAGGCCATCTCGGACATCGCGGGCAAGGCGGGCGAGAACATCATCGCGCTCCGCATCTGGGCGAACCCGCCGACGAAGCTCTACAGCGAGCTCGCCGAGCGGCACCAGAAGAAGTACGGCGAGGCGGCGCCCGGCACGCTCTGGGAGACGTACGGCGCCGCGCGCTGGCTCGTCGACACCATCACCAAGGCCGGCACCTTCGACACGAAGCAGGTCGCCAACGCGCTGGCCGGCTCGAGCTACGCCAACCATCCCTTCGGCCCCGCGTTATGGGGCGGAGAGAAGACGTACGGCATCAAACGGCAGATCGTCATTCCGATCCCCACGTCAATTCTGAAAAATGGCAAGTGGGAGCCGTTCGACGTGAAATCCGGCAAGTTCGACTAG
PROTEIN sequence
Length: 393
MRRSLLALAVLVALAVVSAGAPDSAHAQKAFKIAAIVPVSGPAAAFGLGCQRGLEMAAEDIGVFTVAGEKYKVEIVTYDTVYAPDKTVAAINRAVYNDNVKYSVIIGAGVHPPILPIIRETGFLDFAFAAAGKQVTNPENPTVFRIMASSDQLYQTYAVAIAEKLGAKRIAFLGPNDELGKNDAKAIKAETEKMKAKGVSFVGDEYYERGARDFGPALLRLIAQKPDIIDTDGSPTGSIALIAKQARELGYNGYFVNTTAVLEAKAISDIAGKAGENIIALRIWANPPTKLYSELAERHQKKYGEAAPGTLWETYGAARWLVDTITKAGTFDTKQVANALAGSSYANHPFGPALWGGEKTYGIKRQIVIPIPTSILKNGKWEPFDVKSGKFD*