ggKbase home page

PLM1_100_coex_sep16_scaffold_7859_3

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1758..2339)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 5 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 139.0
  • Bit_score: 157
  • Evalue 1.20e-35
extracellular solute-binding protein, family 5 middle family protein 18 similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 157.0
  • Bit_score: 75
  • Evalue 1.30e-11
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 191.0
  • Bit_score: 245
  • Evalue 6.10e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGATCCCCCAGGACTTCGAGTTCGCCTGGGTCGCGCCCCTCTATCCGTACGATCCGGCCAAGGCCAAGCAGCTCCTCGCCGAAGCCGGCTACCCGAATGGCTTCGACGGCGGCGAGTACTCCATCGACACCGCCTACGGCAGCGTGGGTGAAGCGATCGTCAACTACTGGAAGGCCGTCGGCATCCGCGCGCAGCTCCGGCCGCTCGAGCGCGTCGCCTTCTTCGCCCAGTATCGTGAGAAGAAGCTCCGCAACGTGATCGGGAGCGGCACCGCCGCCTTCGGCAACGCGGCCACGCGCCTGGAAGCGTTCGTCCACTCGAAGGGGATTTACGCCTACGGCGGCTACCCGGACATCGATGGGCTCTTCGAAGAGCAGGCCGCGGAGCTTGACCGGAAGAAGCGCGAGGCGACTCTGCACAAGATCCAGCAGCTCATCCACGAGAAGGTCATGTACTTGCCGATCTGGGAACTGGGGTGGCTGAACGGCGTGGGGCCGCGGGTCGCCGAGTCGGGCCTCGGCCTCATCCCCATGCACGCGTACTCGGCGCCCTACGAGGACCTGAGACTCAAGGACAGGTGA
PROTEIN sequence
Length: 194
MIPQDFEFAWVAPLYPYDPAKAKQLLAEAGYPNGFDGGEYSIDTAYGSVGEAIVNYWKAVGIRAQLRPLERVAFFAQYREKKLRNVIGSGTAAFGNAATRLEAFVHSKGIYAYGGYPDIDGLFEEQAAELDRKKREATLHKIQQLIHEKVMYLPIWELGWLNGVGPRVAESGLGLIPMHAYSAPYEDLRLKDR*