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PLM1_100_coex_sep16_scaffold_12319_1

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 116..673

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 185.0
  • Bit_score: 232
  • Evalue 2.80e-58
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 185.0
  • Bit_score: 151
  • Evalue 1.40e-34
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 179.0
  • Bit_score: 237
  • Evalue 9.40e-60

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 558
GTGCGTGAGGGGCTCGCCGACGACGCTGCGCTGCTCGCGCGGCTGCGCACCGGTGACACGAGGGCGTTCGAGGAATTGGTGACGACGTACCAGCATCGGCTCTTCGGCGTCGCGCTCCGGATGCTCGGCAGCCGCGCCGAGGCCGAGGAGATCGCGCAGGAGACCTTCCTGCGCGCGCACCGCGCGCTCGGCGAGTTCCGCGGCGAGGCGCGCCTGGGCACCTGGCTCTACGCGATCGCCTCCCGGCTGTGCCTCAACCGGCTGGCCGCCGCCTCGCGGCGGCACGAGGCGCCCGACGAGACCGCCCTGCAGCAGCAGCCGGCCGAGGGCGCCGACGCCGCGGCGGTGCTGGAACAGCGCGAGCTGCAGGCGGCGCTGCACGACGCGGTCGCCGCGCTGCCCGAGGAGCGGCGCATCGTCGTCGTCCTGCGCGATCTCGAGGGGCTGGCCTACGAGGAGATCGCCGAGGTCCTCGGGTTGCCCCTGAACACGGTTCGCTCGCGCCTGCACCGGGCGCGGCTGGACCTCAAGGCCAAGCTGGAGCGATGGCTGCCGTGA
PROTEIN sequence
Length: 186
VREGLADDAALLARLRTGDTRAFEELVTTYQHRLFGVALRMLGSRAEAEEIAQETFLRAHRALGEFRGEARLGTWLYAIASRLCLNRLAAASRRHEAPDETALQQQPAEGADAAAVLEQRELQAALHDAVAALPEERRIVVVLRDLEGLAYEEIAEVLGLPLNTVRSRLHRARLDLKAKLERWLP*