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PLM1_100_coex_sep16_scaffold_12834_2

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1652..2581)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 307.0
  • Bit_score: 298
  • Evalue 1.20e-78
pseudouridine synthase bin=GWF2_Methylomirabilis_70_14 species=Sporolactobacillus inulinus genus=Sporolactobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 303.0
  • Bit_score: 357
  • Evalue 9.70e-96
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 305.0
  • Bit_score: 442
  • Evalue 4.20e-121

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 930
GTGCGACGCGTGGATTTGGTGGTCGACGCCCCCGCCGCCGGCGAGCGCCTCGATCGCTGGCTGGCGGCACGCGTCCCCGGCCTCTCCCGGGCACGCCTGCAGGCGCTGATCGCCGGCGGCCACGTGCGGGTGAGCGGCCTGGCGCGCAAACCCTCGCACCGGGTGGTGGCGGGGGAGCGGATCGACGTGGAGATCCCGCCGCTGCCACCCGAGGAGCTCGAGCCGGAGCCGATCGCGCTCAGCGTGGTCCACGAGGACGAGCAGGTGCTGGTGCTCGACAAGCCGGCCGGCGTCGTGGTCCATCCCGGGGCCGGTCACGCGCGCGGCACCCTGGCAGCGGCCGTCCTCGCCCACGCGCCCGGCACCGCCGGCGTCGGCGGCCCGCGCCGCCCCGGCGTCGTGCACCGACTCGACAAGGACACCTCGGGACTGCTCGTCATGGCCAAGACGCCGCTGGCTTACGAGTCGCTCACCGCCCAGCTGGTCGCGCGCACCGTGCGGCGCGTGTATCTCGCCCTGGCGCACGGCCGCGTGGGGCCGGCCGAGGGTGTGATCGACAAACCGATCGGTCGCGATCCGCGTGACCGCAAGCGGATGGCCGTGCGGCCGCTCGGGCAGGGGCGGCGATCGGTGACCAATTTTCGGGTGCTCGAGCGCCTCGGCGATTTCACCTATCTGGAGGCGCGCCTGCAGACCGGGCGGACCCACCAGATCCGCGTTCACCTGGCCAGCCTGGGACACCCGATCGCTGGCGACGAGGTTTACGGCGGCCGGCGCCGCGGACCGCTGCCGGTGCCGCTCGAAGGCCTGGCGTTGCACGCTACGGCCCTGGCCTTCGTGCACCCGGTTACCCAGACGCGCATGGAGTTCGCTTCAGCGTTGCCACCCCGGATCGAGCACCTGCTGTCTCACTTGCGCCACGCCCGCTAG
PROTEIN sequence
Length: 310
VRRVDLVVDAPAAGERLDRWLAARVPGLSRARLQALIAGGHVRVSGLARKPSHRVVAGERIDVEIPPLPPEELEPEPIALSVVHEDEQVLVLDKPAGVVVHPGAGHARGTLAAAVLAHAPGTAGVGGPRRPGVVHRLDKDTSGLLVMAKTPLAYESLTAQLVARTVRRVYLALAHGRVGPAEGVIDKPIGRDPRDRKRMAVRPLGQGRRSVTNFRVLERLGDFTYLEARLQTGRTHQIRVHLASLGHPIAGDEVYGGRRRGPLPVPLEGLALHATALAFVHPVTQTRMEFASALPPRIEHLLSHLRHAR*