ggKbase home page

PLM1_100_coex_sep16_scaffold_16939_3

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1787..2683

Top 3 Functional Annotations

Value Algorithm Source
pyridoxal phosphate synthase yaaD subunit (EC:4.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 287.0
  • Bit_score: 418
  • Evalue 9.70e-115
Pyridoxal biosynthesis lyase PdxS bin=GWC2_Methylomirabilis_70_16 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 287.0
  • Bit_score: 512
  • Evalue 1.70e-142
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 296.0
  • Bit_score: 524
  • Evalue 6.20e-146

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGGAAGAAGCGAGCGGACTGAGAATCGCGGATCGCAAGCACATCGGGCTGGCCGAGATGCTCAAGGGCGGCGTCATCATGGACGTCACCAACGCCGAGCAGGCCAAGATCGCCGAGGACGCCGGGGCCACGTCGGTGATGGCGCTGGAGCGCGTGCCCTCGGACATCCGGCGCGACGGCGGCGTCGCCCGCATGTCGCCGGTGAAGAAGATCCAGGAGATCCAGAAGGCGGTCACCATCCCGGTGATGGCCAAGGCCCGGATCGGCCACTTCGTCGAGGCGCAGATCCTACAAGCGCTGGGTGTGGACTACATCGACGAGTCCGAGGTGCTCACGCCGGCCGACGAGCACTACCACATCGACAAGTTCGCGTTCCGCATCCCGTTCGTGTGCGGCTGCCGTGATCTGGGCGAAGCGCTTCGGCGCATCGGCGAGGGCGCGGCGATGATCCGCACCAAGGGCGAGGCCGGCTCCGGCAACATCGTGGAGGCCGTGCGCCACATGCGCGCGGTCGTCTCCGGCATGAAGCGGCTCACCACCCTCGGCCCCGAGGAGCTGATGACCGAGGCCAAGAACCTCGGCGCGCCCTACGAGCTGGTGCGCTGGATCGCGCGGACCGGCAAGCTGCCGGTGCCGAACTTCTCCGCGGGCGGCATCGCCACGCCGGCCGACGCCGCGCTGATGATGCAGCTCGGCGCCGAGGCCGTCTTCGTCGGCTCCGGTATCTTCAAGTCGTCCGACCCGGCCAAGCGCGCCAAGGCCATCGTCCAGGCCACGACCCACTTCAAGGACCCCGACGTCCTCGTGCGTGTCAGCGAGGATCTTGGCGAGGCCATGGTGGGGCTGGAGATCTCCAAGATGGCTGAGAAAGACCTGCTGCAGACGCGCGGCTGGTAG
PROTEIN sequence
Length: 299
MEEASGLRIADRKHIGLAEMLKGGVIMDVTNAEQAKIAEDAGATSVMALERVPSDIRRDGGVARMSPVKKIQEIQKAVTIPVMAKARIGHFVEAQILQALGVDYIDESEVLTPADEHYHIDKFAFRIPFVCGCRDLGEALRRIGEGAAMIRTKGEAGSGNIVEAVRHMRAVVSGMKRLTTLGPEELMTEAKNLGAPYELVRWIARTGKLPVPNFSAGGIATPADAALMMQLGAEAVFVGSGIFKSSDPAKRAKAIVQATTHFKDPDVLVRVSEDLGEAMVGLEISKMAEKDLLQTRGW*