ggKbase home page

PLM1_100_coex_sep16_scaffold_21333_3

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2080..2586)

Top 3 Functional Annotations

Value Algorithm Source
threonine aldolase (EC:4.1.2.5) similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 163.0
  • Bit_score: 165
  • Evalue 1.10e-38
Threonine aldolase bin=GWC2_Methylomirabilis_70_24 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 168.0
  • Bit_score: 217
  • Evalue 8.50e-54
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 169.0
  • Bit_score: 238
  • Evalue 5.00e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 507
CGCGACGTGCGGGAGTTCACCCGGCCCGTCGACTCCGTCACCTTCTGCCTGTCCAAGGGCCTGGCGGCGCCGGTCGGCTCGGTGGTCTGCGGCTCGGCCGCCTTCATCGAGCGCGCGCGGCGCGTGCGCAAGATGGTGGGCGGGGGCATGCGGCAGGCGGGTATCCTGGCGGCGGCCGGCCTCATCTCACTCGAGCGCATGGTGGACCGCCTGGCCGAGGACCACGCCAACGCCCGCACGCTGGCCGAGGCGGTGGCGGTCATGCCGGCGCTGGCGGTCGACCTGGCCAGCGTGCAGACCAACATCGTCATCGTCCGGGTCGATCGGGGCGACCGACCGCGATCGGCGGCGGCGACCGACGAGCTCGTGAAGGGCTGCGCCGCCCGCAAGGTGAAGATTCACGCAATGAGTCCGACAGCCATCCGGTGCGTGACCCACAAGGACGTGGACACCGAGGACGTCCGCCGGGCCGTCGACGCGTTTCGGGAGTTGACCGCTCGCTGGTAG
PROTEIN sequence
Length: 169
RDVREFTRPVDSVTFCLSKGLAAPVGSVVCGSAAFIERARRVRKMVGGGMRQAGILAAAGLISLERMVDRLAEDHANARTLAEAVAVMPALAVDLASVQTNIVIVRVDRGDRPRSAAATDELVKGCAARKVKIHAMSPTAIRCVTHKDVDTEDVRRAVDAFRELTARW*