ggKbase home page

PLM1_30_b1_sep16_scaffold_349_12

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 11602..12261

Top 3 Functional Annotations

Value Algorithm Source
membrane protein bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 220.0
  • Bit_score: 218
  • Evalue 5.00e-54
membrane protein similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 163.0
  • Bit_score: 113
  • Evalue 6.40e-23
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 220.0
  • Bit_score: 218
  • Evalue 7.00e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Armatimonadetes_69_19_curated → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 660
ATGCGACGCATCCTCACCGTCGCCGTCGTCGCGGCGCTGCTCACCACCACCGCCTGGGTGGTCCACGGTGCGGCGGCCGGCTCTGCCCGCACGGCGGGAGCGTCCCCGCCGGCGGCTGCCAACCCCGGCCCGCCGACCGACGAGCGCGCCCTGGAGCGTGGAGTGCGGACCATCAAGCCGGCCAGTCTGGCGACCCAGCTCGCCAGGGCCCGCCTGGCCACCGGCAAGTACGCGACCAGCCTGCGCGCCGCCAAGGCCGACGGCTACCAGATCATCACCCAGATGATCCCCGACATGGGCTGGCACTTCCTCAACCCGGCCATCGCGGGCTTCGACGTCACCAAGCCACACATCCTGGTCTACGAGCGCCACGGGCGCAGCTGGCAGCTCGGCGCCCTGGAATGGGTCTTCACCGAGACGCCGGCATCCCCGCCGCTCCCGGGGGCGACCTACGGGTCGTTCGCCGCGGCCTGCCACTACACCGACGGCACCTTCGTGTTCGCCCGCGTCCAGGAATTGTGCGCCAAGCGCAGCCCGCAGACCGGCGCCCGCTTCAACTTCTGGCATCCCGACCTGGTGACGCTGCACGTCTGGCTCTGGTACCACAACCCCGACGGCCTCTACAGCGGCACCAATCCCCTGGTCCGACCCTTCAACCGC
PROTEIN sequence
Length: 220
MRRILTVAVVAALLTTTAWVVHGAAAGSARTAGASPPAAANPGPPTDERALERGVRTIKPASLATQLARARLATGKYATSLRAAKADGYQIITQMIPDMGWHFLNPAIAGFDVTKPHILVYERHGRSWQLGALEWVFTETPASPPLPGATYGSFAAACHYTDGTFVFARVQELCAKRSPQTGARFNFWHPDLVTLHVWLWYHNPDGLYSGTNPLVRPFNR