ggKbase home page

PLM1_30_b1_sep16_scaffold_3437_1

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 1..1386

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003684E72 similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 409.0
  • Bit_score: 261
  • Evalue 1.40e-66
SEC-C motif-containing protein,tetratricopeptide repeat protein similarity KEGG
DB: KEGG
  • Identity: 33.6
  • Coverage: 479.0
  • Bit_score: 199
  • Evalue 1.90e-48
SEC-C motif-containing protein,tetratricopeptide repeat protein {ECO:0000313|EMBL:EJZ12197.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.3
  • Coverage: 465.0
  • Bit_score: 199
  • Evalue 5.40e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium vaccae → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
GCACTCGGCCACGACCCCAACCTGGCGCCGGCGCTTTGGGACGCGGCCGACTACGCGGCCACCCGGGGCGACGCCGCCAGCGCCGACGCGCACCTGCGCCGGGTAGGTGCCGCGCCGGAGGACGGGCTGCGTGGGGCGCTGCGGCCGTTGCTGGTCTCGCCGCCGCGCACCACTCCGCGCAACAGCCAGTGCTCGTGCGGGTCGGGACGCAAGTACAAGCAGTGCTGCCTGCGCACCCCCTCCTATCCCCTGTCCACGCGGGCGCCGGCGCGCTATGCCAGCATCGCGGCCTACGCGATGCGCGCCCCCAGCGTCGAGGTGGCCCGGGAGCTGGCCGCGCTGATCGAGCCGGAGGCGGCCATGTTCGCCCTCGACCTGGCGATCTTCGAGGGCGGCGTCCTCCACGACTACCTGGACGAACGCGGGGCCCTGCTGCCAAGCGACGAGCTGGCCATGGTGGAAGGGTGGCGCTCAGTGCCGCTGGCCCCTAACGAGGTGACCGCGGTCCAGCCGGGGGCATCGCTGACCATGCGCCCGCTGCTGGGCGGCGACCCGGTGCGCCTGGCCGACCGGTCGCTGTCGGCCGGCGTGCGGCGCCTGGATCTGCTGGTCGCCCGGGTCCTAGACGACGGGGACGGCCCGGTGCTGCTGGCGCACCCGCTGCGGGCCGACCGGCGGCGGCGCCGGGCGCTGCTGGAGCTGTTCGACGGCGGCTACGAGCCCTGGGAGGTCGCCGCCTTCTTCGGCCCGCAGCCACCACCGCTGCTGCACAACCGCGAAGGCCATCTGCTGATGCAGTGCACCGCCACCTACGACCTCCCCGAGGCCGCGGTCGAGGCGGCCTGGAGGCGGCTGGCCGCCGAGCTGGACGAAGACGACGGGCCGGACCGGCTGCTCGCCACCGGCGAGCTCGACGACGGCGAGCGGGCGATCCGCGGGTCGGTCCACCGCCAGCAGCGCCAGCTGACCATTACGGCCAACTCGGTCGAGCGACTCGGCGAGCTGCAACAGCAGGTGCTGGCCGCCGCACCCGGGTCCCGGCTGGTGTCGGAGTCGATCGTGCCGATGGAGGAGCTGCTGGCCGAGGATGGACAGGACCCGGGGGCCACGGCCGACCGGGATGCCGAGGCCCAGCGGCTGGGCCTCCCGCCGGAGGAGGAGGCCGCGCTGCTCGAGCAGGTCATGCGCGAGTACGAGCAGCGGTGGCTGGACCAGAAACTCCCCGCCCTGAGCGGTCGCACGCCACGCCAGTCCGCGGCGGAGGGCGGGAGCGCGCTCGCCGAACTGCACGCCCTGCTCGACGACATCCAATGGCAGGCCGACAACTCCGGTGGCGGCATGAGCGCCACCCGGATCAGGCGCCACCTCGGCCTCACCGACACCTGA
PROTEIN sequence
Length: 462
ALGHDPNLAPALWDAADYAATRGDAASADAHLRRVGAAPEDGLRGALRPLLVSPPRTTPRNSQCSCGSGRKYKQCCLRTPSYPLSTRAPARYASIAAYAMRAPSVEVARELAALIEPEAAMFALDLAIFEGGVLHDYLDERGALLPSDELAMVEGWRSVPLAPNEVTAVQPGASLTMRPLLGGDPVRLADRSLSAGVRRLDLLVARVLDDGDGPVLLAHPLRADRRRRRALLELFDGGYEPWEVAAFFGPQPPPLLHNREGHLLMQCTATYDLPEAAVEAAWRRLAAELDEDDGPDRLLATGELDDGERAIRGSVHRQQRQLTITANSVERLGELQQQVLAAAPGSRLVSESIVPMEELLAEDGQDPGATADRDAEAQRLGLPPEEEAALLEQVMREYEQRWLDQKLPALSGRTPRQSAAEGGSALAELHALLDDIQWQADNSGGGMSATRIRRHLGLTDT*