ggKbase home page

PLM1_30_b1_sep16_scaffold_4322_5

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(3852..4085)

Top 3 Functional Annotations

Value Algorithm Source
Integrase Tax=Frankia sp. (strain CcI3) RepID=Q2J5I4_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 54.0
  • Bit_score: 99
  • Evalue 1.20e-18
integrase similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 54.0
  • Bit_score: 99
  • Evalue 3.30e-19
Transposase {ECO:0000313|EMBL:ETA00272.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 54.0
  • Bit_score: 99
  • Evalue 1.70e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. CcI6 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 234
TTGTCCTACCGCGACGTCGATGAGCTGCTCACCGACCGCGGCGTCGAGGTCGACCACGTCACCATCTACCGGTGGGCGCAGCGGTTCACGCCGCTGGTGGCCGAGGCCGCTCGGCCCTGCCGCCACGCCGTCGGTGGCCGCTGGCAAGTGGATGAGACCTACGGGCTGGCTGTGGACGCGCCAGTGAACCAGCGGGTAGCGGTCGCGTTCGACGAGCTGGCCGCGGCGATCTGA
PROTEIN sequence
Length: 78
LSYRDVDELLTDRGVEVDHVTIYRWAQRFTPLVAEAARPCRHAVGGRWQVDETYGLAVDAPVNQRVAVAFDELAAAI*