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PLM1_30_b1_sep16_scaffold_5739_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 1557..3521

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 669.0
  • Bit_score: 872
  • Evalue 3.50e-250
DNA-directed RNA polymerase subunit beta Tax=Micromonospora RepID=D9TF69_MICAI similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 669.0
  • Bit_score: 872
  • Evalue 2.50e-250
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 669.0
  • Bit_score: 872
  • Evalue 7.00e-251

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Taxonomy

Micromonospora sp. M42 → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1965
TTGAGCGACCCGCGTACCTCGGCCTCCCTACGACTCTCCTTCGGCAAGATCCCCGAGATCCTTCCCATCCCCGATCTCATCGCCATCCAGCGCCAGTCCTTCGAGTGGCTGATCACTGACGGTCTCCGTGAGACCTTCGACGAGATCAGCCCGATCGAGGACTTCACCGGCCAGATGGCGCTCACGTTCGGGGAGCACCGTTTCGAGGAGCCCGAGCATTCTGTCGAGGAGTGCCGGGAGCGAGACAACACCTACTCCCGCAAGCTCCACGTCCAGGCCGAGTTCCAGAACCGCACCACCGGTGAGATCAAGTCCCAGTCGGTCTTCATGGGCGACTTCCCGGTCATGACCGACCAGGGCACCTTCATCATCAACGGCACCGAGCGCGTCGTGACCTCGCAGCTGGTCCGCTCGCCCGGCGTCATCTTCGAGCAGGAGCCCGACAAGACCCTCGACAAGCTGCTCACCTCCTGCCGGGTCATCCCGGCCAGAGGCGCGTGGCTTGAGTTCGACGTCGACAAGAAGGACACCGTCGGCGTCCGCCTCGACCGCAAGCGCCGCCTGCCCGTGACCGTGCTCCTGCGCGGCCTCGGCATGGGCGACGAGCAGATCCGTGAGCGGTTCGGCGAGTCCGAGACCATGATGGGCACGCTCGAGAAGGACCACACCAAGACCGAAGAGGACGCGCTGGTCGAGATCTACCGGCGCCTGCGCCCGGGCGAGCCGCCCAGCGCCGAGTCCGGCCGCCAGCTCCTGCACGGCCTCTTCTTCCAGCCCAAGCGCTACGACCTGGCCAAGGTCGGCCGCTACAAGATCAACAAGAAGCTGGGCCTGGAGAACGAGCAGCACAAGGCCCTGACCCTCACCACCGACGACGTCGTGGCCACCGTGGACTACCTGGTCCGGCTGCACGAGGGCGACCCCACGACCAGCACCGACGACCAGGACCACTTCGGCAACCGGCGCCTGCGCTCGGTCGGCGAGCTGATCCAGAACCAGGTCCGCATCGGCCTGTCGCGGATGGAGCGGGTCGTGCGCGAGCGCATGACCACCCAGGACGCCGAGGCGATCACCCCCCAGACGCTGATCAACATCCGTCCGGTGGTGGCCGCGATCAAGGAGTTCTTCGGCACCTCGCAGCTCAGCCAGTTCATGGACCAGACCAACCCGCTGGCCGCCCTGACCCACCGGCGGCGCCTGTCGGCGCTCGGCCCGGGCGGGCTGTCGCGTGAGCGGGCCGGGTTCGAGGTCCGCGACGTCCACCCGTCGCACTACGGCCGCATGTGCCCGATCGAGACGCCCGAGGGCCCGAACATCGGCCTCATCGGCAACCTCTCCACCTACGCCCGGATCAACGAGTACGGCTTCGTGGAGACGCCCTACCGCAAGGTGGTCAACGGCCGGGTCACCGAGCAGGTCGACTACCTGACCGCCGACGACGAGGACCTGCACGTGATCGCGCAGGCCAACGCGGCCGTGGAAGCCGACGGCAACTTCGCCACCGACCGTGTCCTGGTCCGCCAGGGCAGCCGCTCGGCCGGCATCTCCAGCCACCGCTCGGTCAGCCGGGCCGACTTCGGCACCGGCCAGGGCGCCGGCGTCACCGGCGAGGTGGCCAACGTGCCGCCCGAAGAGGTCGACTACATGGACGTCAGCCCCCGGCAGATGGTGTCGGTGGCCACCGCCCTGATCCCGTTCCTGGAGCACGACGACGCCAACCGGGCCCTGATGGGGGCCAACATGCAGCGCCAGGCCGTGCCCCTGCTCCGCTCCGAGGCGCCGCTGGTCGGCACCGGCATGGAGCGGCGGGTGGCGGTCGACGCCGGCGGGGTGGTCGTGGCCGACGCCCCGGGCACGGTCGAGGACGTCACCGCCGACCAGGTCACCGTCCGCCACGCCGACGGCTCGGCCAAGGTCTACCGGATGCGCAAGTTCGAGCGCTCCAACCAGGGCACCTGCATCAAC
PROTEIN sequence
Length: 655
LSDPRTSASLRLSFGKIPEILPIPDLIAIQRQSFEWLITDGLRETFDEISPIEDFTGQMALTFGEHRFEEPEHSVEECRERDNTYSRKLHVQAEFQNRTTGEIKSQSVFMGDFPVMTDQGTFIINGTERVVTSQLVRSPGVIFEQEPDKTLDKLLTSCRVIPARGAWLEFDVDKKDTVGVRLDRKRRLPVTVLLRGLGMGDEQIRERFGESETMMGTLEKDHTKTEEDALVEIYRRLRPGEPPSAESGRQLLHGLFFQPKRYDLAKVGRYKINKKLGLENEQHKALTLTTDDVVATVDYLVRLHEGDPTTSTDDQDHFGNRRLRSVGELIQNQVRIGLSRMERVVRERMTTQDAEAITPQTLINIRPVVAAIKEFFGTSQLSQFMDQTNPLAALTHRRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIGLIGNLSTYARINEYGFVETPYRKVVNGRVTEQVDYLTADDEDLHVIAQANAAVEADGNFATDRVLVRQGSRSAGISSHRSVSRADFGTGQGAGVTGEVANVPPEEVDYMDVSPRQMVSVATALIPFLEHDDANRALMGANMQRQAVPLLRSEAPLVGTGMERRVAVDAGGVVVADAPGTVEDVTADQVTVRHADGSAKVYRMRKFERSNQGTCIN