ggKbase home page

PLM1_30_b1_sep16_scaffold_5887_4

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(2908..3240)

Top 3 Functional Annotations

Value Algorithm Source
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Salinispora arenicola (strain CNS-205) RepID=A8M3G8_SALAI similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 103.0
  • Bit_score: 179
  • Evalue 1.70e-42
4Fe-4S ferredoxin similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 103.0
  • Bit_score: 179
  • Evalue 4.80e-43
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:ABP56190.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 103.0
  • Bit_score: 179
  • Evalue 2.40e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinispora tropica → Salinispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 333
GTGACCTACGTCATCACCGAGCCCTGCATTGAGGTCAAGGACAAGTCCTGCATCGAGGAGTGCCCGGTCGACTGCATCTACGAGGGCGACCGCATGCTCTACATCCACCCCGACGAGTGCGTGGACTGCGGCGCCTGCGAGCCCGTCTGTCCGGTGGAAGCCATCTTCTACGAGGACGACGTGCCCGCCCAGTGGAAGGACTTCACCGCCGCCAACGCGGCCTTCTTCACCGAGGGTGAGGAGCCGCTCGGCTCCCCGGGCGGGGCGGCCAACGTTGGCGCTGTGCTGCGCGATGCCGAGTTCGTCGCCAACTATCAGGTCTCAGAGACCTAG
PROTEIN sequence
Length: 111
VTYVITEPCIEVKDKSCIEECPVDCIYEGDRMLYIHPDECVDCGACEPVCPVEAIFYEDDVPAQWKDFTAANAAFFTEGEEPLGSPGGAANVGAVLRDAEFVANYQVSET*