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PLM1_30_b1_sep16_scaffold_6506_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 1847..2596

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LV58_ACIC1 similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 247.0
  • Bit_score: 387
  • Evalue 9.20e-105
RNA polymerase sigma factor WhiG similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 247.0
  • Bit_score: 387
  • Evalue 2.60e-105
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 247.0
  • Bit_score: 387
  • Evalue 1.30e-104

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Taxonomy

Acidothermus cellulolyticus → Acidothermus → Acidothermales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 750
GTGGAACGGCTGTGGGAGGAATTCAAGCTCAAGGCGTCCGCTGACGCCCGTGAGCGGCTCATCCTCCACTACGCGCCGCTGGTCAAGTACGTGGCTGGTCGGGTCTCGGTCGGCCTGCCACCGAACATCGAGCAGGCCGATCTGGTGTCCTATGGCATCTTCGGTCTGATCGACGCGATCGAGAAATACGATCTCGAACGGGGCATCAAGTTCGAGACCTACGCGATCTCGCGGATCAAGGGCGCGATCATCGACGAGTTGCGGGCCATCGACTGGATCCCCCGGTCGGTCCGGTTCAAGGCGCGCGAGGTCGAGAAGGCCTACGTCGCCCTGGAGAACCGTCTGCATCGCAGCCCCACCGATGCCGAGGTCGCCCAGCAGCTCGGCATCACCACCGACGAGCTGCACCAGATCTTCAACCAGATCTCGTTCGTGTCGGTGGTCGCGCTCGACGAGCTGCTCTCGGTCGGCTCCGAGCGCGGCGACCGGCTCAGCCTGGTCGACACCTTGGAGGACAAGGGCGCCGAGGACCCGGTGGCCGTCTTTGAGTCCCAGGAGATGAAGGGCATCCTGGCCAACTCGATCAACCGCCTCGGTGAGCGGGAGAAGATCGTGATCACCCTCTACTACTACGAGGGCCTCACTCTGGCCGAGATCGGGCAGGTCCTGGGCGTCACCGAGTCGCGGGTCTGCCAGATGCACACCAAGGCCGTGCTCCAGCTCCGGGCGAAGATGCAGGACGCGCGCTGA
PROTEIN sequence
Length: 250
VERLWEEFKLKASADARERLILHYAPLVKYVAGRVSVGLPPNIEQADLVSYGIFGLIDAIEKYDLERGIKFETYAISRIKGAIIDELRAIDWIPRSVRFKAREVEKAYVALENRLHRSPTDAEVAQQLGITTDELHQIFNQISFVSVVALDELLSVGSERGDRLSLVDTLEDKGAEDPVAVFESQEMKGILANSINRLGEREKIVITLYYYEGLTLAEIGQVLGVTESRVCQMHTKAVLQLRAKMQDAR*