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PLM1_30_b1_sep16_scaffold_6978_4

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(2167..3975)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RecO Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYR4_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 244.0
  • Bit_score: 248
  • Evalue 1.60e-62
DNA repair protein recO similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 244.0
  • Bit_score: 248
  • Evalue 4.60e-63
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 244.0
  • Bit_score: 248
  • Evalue 2.30e-62

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1809
CTGCTGGACGAGCCGACCAACAACCTCGACTTTGACGGACTGGCCCGCCTGGAGCGGTTCCTGGCCACCGAGGAGCGGCCAGTGGTGCTGGTCAGCCACGACCGGGCCTTCCTGTCCGCCGCCACCACCCGCATCGCCGAGCTCGACCTGCACACCCGCCGCCTGGCCGAGTACGGCGGCGGCTACGACGCCTATGTCGAGGAGCGCCGCCGCCGGCGCGAGCAGGCCCACGCCGACTACGACGAGGCCAGGGCCGAGCGGTCGCGGCTGGAGGAGGCGGCCCGCCAGAAGCGCGAGTGGGCGGCCAGCCGCCGGGGTGAGCGGCGCACCGACAACGACAAGGCCCTGGCCGGGCGGCGCAAGGAGCGGGCCACCGCCGGCGCCACCAGGGCCAAGGCGATCGAGCGGCGCCTGGACCGCCTCGGCGACCCCGGGAAGCCCTGGGAGGGCTGGGACCTGCGCCTGTCGCTCCAGGCCGGCCGGCGCAGCGGCGAGGTCGTTGCTCGCCTGGCCGGGGCGACCGTGCGGCGGGGCGGCTTCCGGCTCGGCCCGGTCGACCTGGAGCTGCGCTGGCGCGACCGCCTGGCCCTGACCGGGCCGAACGGCGCCGGCAAGTCGACCCTGCTCGGGCTGCTGACCGGCGAGCTGCGGCCCGAGGAGGGCACCGTCCGGCTCGGGTCGGGGGTGGTCGTCGGCCACCTCGGCCAGGACCGCACCCCTGGCCCGGGCACCCTGCTGGACGCGGTACGGCAGCGGACCGAGCTGTCGGTCGAGCAGGCGCGGTCCCTGCTGGCCCCGAGGCGGCGCTGTCGCCGGGCGAGCGCTCCCGGGCCGGCCTGGCCGTGCTGGTCGCCCGGGGCACCAACCTCCTACTGCTGGACGAGCCGACCAACCACCTGGACCTGGACGCCATCGAGGAGCTGGAACAGGCCCTGCAGGGCTACGACGGCACCCTGGTCGTGGTCAGCCACGACCGGCGCCTGCTGGCCGGCCTGCGCCTCGACCGGCGCCTCGAGGTGGTCGCCGGCCGGGTGGCCGAGGCGCCCCTGCCGGTCGCCGCTCCCGGATAGACTGAGCGGAATGAACCTCTACCGCGAGCAGGGCGTCGTGCTGCGGACCTGGAAGCTCGGCGAGGCCGACCGCATCGTCGTGCTGCTCACCCAGGGCGAGGGCAAGGTCAGGGCGGTCGCCAAGGGGGTCCGCAAGACCAAGTCGCGCTTCGGCGGCCGCCTGGAGCCGTTCAGCCATGTCGACCTGTCGCTGTACCGGGGGCGCGAGCTCGACATCGTCACCCAGGCCGAGGTCATCACCCCGTTCCGGGCCCTGCGCGAGGACTACGACCGGGTGGTGGCGGGCGCGGCCATGCTCGAGGCGGTCGACCAGGTCGCCCAGGAGCGCGAGGCCGCCATCCGGCTGTACCTCCTGCTGGTCCGGGCCCTGCGGGCCCTGGACAGCGCCCCCCGCGACCCGTCGGTGGTGCTCGACGCCTTCCTGCTCAAGCTGATGGCGCTGGAGGGGTACCGGCCGGCGCTGGCCGAGTGCGCCGGCTGTGGGGCCAAGGGGCAGCCGCGCTGCTTCTCGATCGCCCGCGGCGGCGGGCTGTGCGAGCGCTGCCGCACCGGGGAGGAGTCGACCCTTGACGCCGACACCATGCCCCTGCTGACCGCCCTGCTCGGCGACGACCTGGACACCACGGCCGGCGCCGAGCCCGCCCCGGCCTCCCGGCGCGAGGCCGGCGCCCTGGTCAAGGGCTACGTCGAGTACCACCTGGACCGCCGCCTGCGTGCCTACCCCCTGGTGGCCCGCTGA
PROTEIN sequence
Length: 603
LLDEPTNNLDFDGLARLERFLATEERPVVLVSHDRAFLSAATTRIAELDLHTRRLAEYGGGYDAYVEERRRRREQAHADYDEARAERSRLEEAARQKREWAASRRGERRTDNDKALAGRRKERATAGATRAKAIERRLDRLGDPGKPWEGWDLRLSLQAGRRSGEVVARLAGATVRRGGFRLGPVDLELRWRDRLALTGPNGAGKSTLLGLLTGELRPEEGTVRLGSGVVVGHLGQDRTPGPGTLLDAVRQRTELSVEQARSLLAPRRRCRRASAPGPAWPCWSPGAPTSYCWTSRPTTWTWTPSRSWNRPCRATTAPWSWSATTGACWPACASTGASRWSPAGWPRRPCRSPLPDRLSGMNLYREQGVVLRTWKLGEADRIVVLLTQGEGKVRAVAKGVRKTKSRFGGRLEPFSHVDLSLYRGRELDIVTQAEVITPFRALREDYDRVVAGAAMLEAVDQVAQEREAAIRLYLLLVRALRALDSAPRDPSVVLDAFLLKLMALEGYRPALAECAGCGAKGQPRCFSIARGGGLCERCRTGEESTLDADTMPLLTALLGDDLDTTAGAEPAPASRREAGALVKGYVEYHLDRRLRAYPLVAR*