ggKbase home page

PLM1_30_b1_sep16_scaffold_8020_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(1786..2484)

Top 3 Functional Annotations

Value Algorithm Source
Transposase, IS605 OrfB family Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8IGN4_ALIAT similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 222.0
  • Bit_score: 235
  • Evalue 4.20e-59
transposase, IS605 OrfB family similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 222.0
  • Bit_score: 235
  • Evalue 1.20e-59
Transposase, IS605 OrfB family {ECO:0000313|EMBL:AEJ44314.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus; acidocaldarius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 222.0
  • Bit_score: 235
  • Evalue 5.80e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicyclobacillus acidocaldarius → Alicyclobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 699
GTGATCGGAGTTGACCGGGGCGTCGCCGTGTTCGCAGTCTGCTCTGACGCTACCAACATTGATGGCCCCCGAGCGCTGTCCCGGAGCTTACGGAGGCTGCAGCAACGTAGTCGGGCGGTAAGCCGTAAGCAGCCGGGCTCGACCAACCGCCGCAAATCGGCGTTGGCCCTGGCGCGACTGCACCGCCGCATCCGCAACCAGCGGCTGGATGCACTACACAAGGCCACCACGGCGCTGGCGAAAACCAAGTCGGTGATCGTGGTGGAGGACCTGCACATAGCCGGCATGGTCCGCAACCGCCACCTGGCCCGTGCCATCAGCGACCAAGGTTGGGCGGAGTTCCATCGGCAACTGGCCTACAAGTGCCAGTGGCATGGGTCGCGGCTACTTGTTGCACCGCGCTTCTATCCGTCATCGAAGGCCTGCTCCAGCTGCGGGCTCGTCAAGGCAGAGCTGCCGCTGAATGTGCGCACCTTCCGTTGCGAGGCCTGCGGGTTAGTGCTTGACCGCGACCAGAACGCCGCAAGGAACCTGGCTGCCTTGGCTGCTTCTGGTTCGATCACCAAAGGGGTCGTCGGGAGTTCCCTGGAGACCGAAAACGCCTGTGGAGGGGAAAGCGCTGGCCCGGCCGTCACCGGTCGGGTGGAACTGGCCTCGGCGAAGCAGGAACGGGCCAATCAACGCCTTGCGAATGCGTAA
PROTEIN sequence
Length: 233
VIGVDRGVAVFAVCSDATNIDGPRALSRSLRRLQQRSRAVSRKQPGSTNRRKSALALARLHRRIRNQRLDALHKATTALAKTKSVIVVEDLHIAGMVRNRHLARAISDQGWAEFHRQLAYKCQWHGSRLLVAPRFYPSSKACSSCGLVKAELPLNVRTFRCEACGLVLDRDQNAARNLAALAASGSITKGVVGSSLETENACGGESAGPAVTGRVELASAKQERANQRLANA*