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PLM1_30_b1_sep16_scaffold_8437_4

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 1431..2669

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin8_Chloro species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 415.0
  • Bit_score: 521
  • Evalue 4.00e-145
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 404.0
  • Bit_score: 477
  • Evalue 2.40e-132
Tax=CSP1_4_Chloroflexi similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 415.0
  • Bit_score: 521
  • Evalue 5.50e-145

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Taxonomy

CSP1_4_Chloroflexi → Gitt-GS-136 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1239
GTGGCCGAGGAGACCCGTGCGCTGGTTGAGCGGGTGTTCCGGGAGGAGTCCGGGCAGGCCGTGGCCACCCTCATCCGCGTCCTTGGCGACTTCGACCTCGCCGAGGAGGCGGTCCAGGAGGCCTTCCTGGTCGCCATCCAGCACTGGCCGAGCGCCGGCGTCCCCGACCGGCCCGGGGCCTGGATCATCACCACCGCCCGCAACAAGGCCATCGACCGCCTCCGCCGCGAGCGCGGGCTGGCCGAGCGCCGGGCCACCCTGGCCCTGCTCGAGGCGGCCCGCGGCCAGGACACCGAGATGCAGACCATCGCCGACGACCGGCTGCGGCTGATCTTCACCTGCTGCCACCCGGCGCTGTCGCCCGAGGCCCGGGTCGCCCTCACCCTCCGTACCCTGGGAGGGCTGTCGACGCCTGAGATCGCCCACGCCTTCATGGTCCCGGAGGCGACCATGGCCCAGCGGCTGGTCAGGGCCAAGCGCAAGATCCGAGACGCCGCCATCCCCTACCGGGTGCCGCCCGACCATCTGCTGCCGGAGCGGCTCGGGTCGGTGCTGGCCGTCCTCTACCTGATCTTCAACGAGGGCTATGCCGCCAGCGCCGGGGACGCCCTGGTCCGGCGGGAGCTGTGCGCCGAGGCGCTGCGGCTCGGCCGGGTTCTGGCCGAGCTGATGCCCGACGAGGGCGAGGCGCTGGGGCTGCTGGCCCTGCTGCTGCTCCACGACGCCCGCCGCGAGGGGCGGGTCGGCCCCGGGGGCGAGCTGGTCCTGCTCGAGGACCAGGACCGGAGCCGCTGGGACCGGGCCAAGATCCACGAGGGCATCAAGCTGCTCGACCAGGCGATCCGCCGCGGCCCCGCCGGCCCGTACCGGCTCCAGGCCTGCATCGCCGCCCTGCACGCGGTCGCCCCGACGGCCGAGGCCACCGACTGGCGGCGCATCACCCTCCTGTACGACCAGCTGATGGCGGTGGCCGGCTCCCCCGTGGTCGCCCTCAACCGCGCGGTCGCGGTGGCCATGGTCGAGGGCCCGGCAGCCGGCCTCGACCTGATGGACACCCTGGCCGCCTCCGGCACCCTCGACAGCTACCACCTCCTCCACGCCGCCCGCGGCGACCTCCTCCGCCGCCTGGGTCGCGCCCCCGAGGCGGCCGCCGCCTACCGCCGCGCCCTGGAGCTGGCCACCAACCCGGTCGAGCAGACCTTCCTCAGCCACCGCCTGTCCGAGGTCGACCCCGCCTGA
PROTEIN sequence
Length: 413
VAEETRALVERVFREESGQAVATLIRVLGDFDLAEEAVQEAFLVAIQHWPSAGVPDRPGAWIITTARNKAIDRLRRERGLAERRATLALLEAARGQDTEMQTIADDRLRLIFTCCHPALSPEARVALTLRTLGGLSTPEIAHAFMVPEATMAQRLVRAKRKIRDAAIPYRVPPDHLLPERLGSVLAVLYLIFNEGYAASAGDALVRRELCAEALRLGRVLAELMPDEGEALGLLALLLLHDARREGRVGPGGELVLLEDQDRSRWDRAKIHEGIKLLDQAIRRGPAGPYRLQACIAALHAVAPTAEATDWRRITLLYDQLMAVAGSPVVALNRAVAVAMVEGPAAGLDLMDTLAASGTLDSYHLLHAARGDLLRRLGRAPEAAAAYRRALELATNPVEQTFLSHRLSEVDPA*