ggKbase home page

PLM1_30_b1_sep16_scaffold_12559_2

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 261..470

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding protein RbpA Tax=Propionibacterium acnes SK182B-JCVI RepID=F9NU22_PROAA similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 60.0
  • Bit_score: 57
  • Evalue 3.50e-06
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acnes SK182B-JCVI.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 60.0
  • Bit_score: 57
  • Evalue 5.00e-06
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 63.0
  • Bit_score: 56
  • Evalue 2.90e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Propionibacterium acnes → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGGACGACGGCCTGTCCCCGCTTCCGGCGGAGTTCGACCGGCTGCAGGCACCCTCGAGCGCCTATGCGCCCCGGCAGGTCGTCACCTACCTCTGTACCCGGGAGCACGTGGTGTCGGTGCCGTTCGCGGCCGACGCCGAGGTCCCCGAGGTCTGGGACTGCCGCTGCGGCCAGCCGGCAACGAGGGTGGCGGCCGCCGACGCCTCCTGA
PROTEIN sequence
Length: 70
MDDGLSPLPAEFDRLQAPSSAYAPRQVVTYLCTREHVVSVPFAADAEVPEVWDCRCGQPATRVAAADAS*