ggKbase home page

PLM1_30_coex_sep16_scaffold_3563_2

Organism: PLM1_30_coex_sep16_Actinobacteria_68_7

near complete RP 43 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(113..967)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI00037B4A27 similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 296.0
  • Bit_score: 246
  • Evalue 2.90e-62
histone deacetylase superfamily similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 308.0
  • Bit_score: 243
  • Evalue 5.30e-62
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 285.0
  • Bit_score: 282
  • Evalue 5.10e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 855
TTGATCCCGTTCATAAGCCACGGCGACTTCGCCCGCCTGCATCCGACCGGCGGCCACCCCGAGCGGCAAGAGCGCATTCGCGTCCTCCACCAGGCCTTTCCCGACTTCGAAGAGCCGCGGCGAGCGAGCGAGGCGGAGCTCACGTACTGCCACGATCCCGACTACATCCGCTTCATCCGAGAGACGTCGGAGAGCGGTCGAACCGTCAATCTCGATGAGGACACCATCTGCACGCCGTCCTCATACGAGACCGCGCGGCTTGCGGCCGGCGCGGCGATCACTGCCGTCGAGCGCGGCGGGTTCGCACTCGTTCGGCCTCCGGGACACCATGCCCTCCCCGGACGCGCGATGGGCTTCTGCCTCTTCGCGAACGTCGCCGTTGCGGCCCGCTGGGCCCAGATCGAGCTCGTTGCCGAGCGCATCGCCATTCTCGACTGGGACGTGCATCACGGGAACGGCACGCAGGACATCTTCTGGAGCGATCCTTCCGTCCTCTTCGTCTCGCTCCATCAATGGCCCTTCTGGCCGGGCTCCGGAGGGCCGGGGGAGGGCAACGAGACGACGATCAACGTTCCGCTGGAGGCGGGCTCGGGAGACGATCAGTACGTTGCGGCGATGGAAGAGATCGTCGAGCCGGCGATCGGCGCCTTCGAGCCTGACCTCCTCCTCGTGTCGGCGGGATTCGACGCCGGCGCCGGCGACCTGCTCGGCGGAATGCAAATAACGGAGGCAGGCTTCGCCGAACTCGCCCGCCGGACCAACGGGCTCTGCGAGCGCGTCGCTCTCGTCCTGGAGGGCGGCTACACGCTCGAGACCTTGCCCGGCTTCGTGGGAGCGGTCGCTCAGGAGCTTTGA
PROTEIN sequence
Length: 285
LIPFISHGDFARLHPTGGHPERQERIRVLHQAFPDFEEPRRASEAELTYCHDPDYIRFIRETSESGRTVNLDEDTICTPSSYETARLAAGAAITAVERGGFALVRPPGHHALPGRAMGFCLFANVAVAARWAQIELVAERIAILDWDVHHGNGTQDIFWSDPSVLFVSLHQWPFWPGSGGPGEGNETTINVPLEAGSGDDQYVAAMEEIVEPAIGAFEPDLLLVSAGFDAGAGDLLGGMQITEAGFAELARRTNGLCERVALVLEGGYTLETLPGFVGAVAQEL*