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PLM1_30_coex_sep16_scaffold_3930_6

Organism: PLM1_30_coex_sep16_Actinobacteria_68_7

near complete RP 43 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 4739..5326

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigM Tax=Streptomyces sp. PsTaAH-124 RepID=UPI0003763E63 similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 187.0
  • Bit_score: 130
  • Evalue 1.20e-27
RNA polymerase sigma factor {ECO:0000313|EMBL:AKG44056.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 168.0
  • Bit_score: 131
  • Evalue 1.30e-27
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 190.0
  • Bit_score: 130
  • Evalue 3.40e-28

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Taxonomy

Streptomyces xiamenensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGACCGCCCTCGCCCCCGACTACGTCGCGCCGGGCGTACTCGACCGTGCCCGTAGTGGCGATCACGACGCGTTCACCGCCGTCGTCCGTCTCTACGACCTCCGGCTCCGAGGGGTCGCCTACCGCGTCCTCGGCGACCGAGAAGGCATGGACGACGCCCTCCAGGAAGCCTACGTCAGGGCGTTTCGCGCGCTCCCGCGTTTTCGCGGCGATGCGCGGATCGGCACCTGGCTCTTCCGCATCACGTACAACGCCTGTCTCGACGAGCTCGCTCGCAAGCGCAAGGTCACGCACGTTCCGCTGGACGAGCTCGTCGAGCAGGCAAGCGGCGAGCCTGAGCCGGGCGATGCACTCCAGGCCCGCCGCGACCTCGCGACGTCGTTTGCCGCCCTCTCGAAAGCTGAGCGCGCGGTCGTGTTTCTCGTAGACGTCCAGGGCTTCGACTATTCAGGTGCAGCCGAGCTGCTCGGAGTCCCGGTCGGAACCGTTGCGTCCAGACTGAACCGTGCCCGCCGAAGTCTTCGCAGCGGGCTGCGGCCTACCGGCGAAGGGTTCCACACCGAGTCGGAGAACCTCACAAACTCGTGA
PROTEIN sequence
Length: 196
MTALAPDYVAPGVLDRARSGDHDAFTAVVRLYDLRLRGVAYRVLGDREGMDDALQEAYVRAFRALPRFRGDARIGTWLFRITYNACLDELARKRKVTHVPLDELVEQASGEPEPGDALQARRDLATSFAALSKAERAVVFLVDVQGFDYSGAAELLGVPVGTVASRLNRARRSLRSGLRPTGEGFHTESENLTNS*