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PLM1_30_coex_sep16_scaffold_5557_9

Organism: PLM1_30_coex_sep16_Actinobacteria_68_7

near complete RP 43 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 4106..4570

Top 3 Functional Annotations

Value Algorithm Source
rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 157.0
  • Bit_score: 88
  • Evalue 4.20e-15
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas noxia F0398.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.8
  • Coverage: 155.0
  • Bit_score: 87
  • Evalue 1.30e-14
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 166.0
  • Bit_score: 82
  • Evalue 1.10e-13

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Taxonomy

Selenomonas noxia → Selenomonas → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 465
GTGACCGATCTCGTTTTGGTCGGCCGCGTCGGCCGGCCGCACGGGCTCGACGGCTCGTTCGTCGTCGAGGACGCAAGCGAGGACCCTGAGCGGTTCGTGGCAGGCTCGCCCATCCTCCTCGACGGAGAGCAGGCCAAGGTGGTCACCTCCAAGCGCGCCGGGCGGCGGCTCGTCGTCCGCCTCGACCGCGAGGCGAGGCGCGGCGCGGCGCTCGCCGTGCCGCGAAGCGTCCTCCCGGAGACGGCCGAGGACGAGTACTACGTGTTCCAGCTAGTCGGCCTGGCCGTGGAGGAAGAAGGCGGCCGCGCACTCGGGCGCGTGCAGGACGTTGCCCCCGGTGTGGCGAACGACGTGCTCGAGCTCGACACCGGGACCGCGCTCCCGCTCGTCGAGGATTGCGTTCTTGCCGTCGACCTCGACCAGGGACGCATCCTCGTGGCGCAGGGGTTCGCTCCCGAAAGCTAG
PROTEIN sequence
Length: 155
VTDLVLVGRVGRPHGLDGSFVVEDASEDPERFVAGSPILLDGEQAKVVTSKRAGRRLVVRLDREARRGAALAVPRSVLPETAEDEYYVFQLVGLAVEEEGGRALGRVQDVAPGVANDVLELDTGTALPLVEDCVLAVDLDQGRILVAQGFAPES*