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PLM1_30_coex_sep16_scaffold_12404_2

Organism: PLM1_30_coex_sep16_Actinobacteria_68_7

near complete RP 43 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(359..1342)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor bin=bin9_gal15 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15 similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 307.0
  • Bit_score: 304
  • Evalue 1.00e-79
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 308.0
  • Bit_score: 298
  • Evalue 1.60e-78
Tax=RBG_16_Actinobacteria_67_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 297.0
  • Bit_score: 373
  • Evalue 2.50e-100

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Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 984
GTGGGACGGCCTGTCCGCAGACTGCCTTCGCCCGAACCCGATCCGGCTCCCGGGGAGGACGGCGAGGAGACGAAGCTCGAGCTCGTGCCCGAGGCGGCTCTGGACGTCCCGGCCGACGCCGAGGACGAGGACGATCGCAAAGAACGCTTGGCGGCCGGACCGACCCAGGATCCGCTCAAGCTCTACGTCCGTCAGATCGGCGACGGGCCCCTCCTGACCCCTGCTGAGGAGCGCGAGCTCGCGAGGCTGAAGGACGAGGGTGACGAGGCTGCCAAGCGCCGCCTGATCGAGTCGAACCTGCGGCTCGTCATGTCGATCACCCGCAACTACGTCAACTCGGGCGTCCCACTGCTCGACCTGATCCAGGAGGGAAACCTCGGCCTCATCCGCGCCGTGGAGAAGTTCGACTACAAGATGGGCTACAAGCTTTCGACCTACGCCACCTGGTGGATCCGCCAGGCAGTGACACGCGCGATCGCCGACCAGGGCCGCACGATCCGCCTTCCCGTCCACGTCGTCGACCAGGTGCGGCGCGTGATGCGCGCGCGCCGGATCCTCACGCAGAAGCTCAACCGCGACCCGCTCCCGGACGAGATCGCCAAGGAGAGCGGCTTCGACGTCAAGCGTGTCCACGAGCTCCTCGATCTCGTGGAGGACCCCGTCAGCCTCGAGACGCCCGTCGGTGACGGCGACTCCATGTACGCCGACATGATCGAGGACGTCAACTCCGAGCAGCCGGAAGCGACGCTCGCCGTCATGCTTCGCAGCGCGGAGCTCCAGGTCGCGCTGGCCCAGCTCTCCGAGCGCATGCGGCACGTGCTCGAGCTTCGGTTCGGGCTCACCGGCGCGGTTCCGAAGACGCTCGAGGAGGTCGGCGCCGAGCTCGGTGTGACCCGCGAGCGCGTCCGCCAGCTTGAGTCACGAGCCCTCCGCGAGCTCCAAGCGGCAGCGCCCGACCTGCGGCTCTATCTCCGCACCGACTAG
PROTEIN sequence
Length: 328
VGRPVRRLPSPEPDPAPGEDGEETKLELVPEAALDVPADAEDEDDRKERLAAGPTQDPLKLYVRQIGDGPLLTPAEERELARLKDEGDEAAKRRLIESNLRLVMSITRNYVNSGVPLLDLIQEGNLGLIRAVEKFDYKMGYKLSTYATWWIRQAVTRAIADQGRTIRLPVHVVDQVRRVMRARRILTQKLNRDPLPDEIAKESGFDVKRVHELLDLVEDPVSLETPVGDGDSMYADMIEDVNSEQPEATLAVMLRSAELQVALAQLSERMRHVLELRFGLTGAVPKTLEEVGAELGVTRERVRQLESRALRELQAAAPDLRLYLRTD*