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PLM1_30_coex_sep16_scaffold_13130_5

Organism: PLM1_30_coex_sep16_Actinobacteria_68_7

near complete RP 43 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(3308..3970)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F144_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 205.0
  • Bit_score: 262
  • Evalue 2.30e-67
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 205.0
  • Bit_score: 262
  • Evalue 6.50e-68
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 220.0
  • Bit_score: 353
  • Evalue 1.80e-94

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGTCCCGCCGTCAGCTCGCTACGGCTCGCCCGCTTGAGAAAACCCAGCGAGAACTCGAAGACCTTCGGTTGGTCCTGCGGGCTCGCAACGGCGACGACGTGGCGCTCGACGCGCTCGTCCGCCGCTACACCGGCTTCGTCCGCCTGAAGGCGAGTTCCTACTTCCTCGCCGGCGGCGAGTCGGACGACCTCATCCAGGAAGGCTTGATTGGCCTCTACAAGGCCGTGCGCGATTTTCGAACCGACAAGGAGACGTCGTTTCGCAGCTTCGCTGAACTCTGCATCACGCGCCAGATCATCACGGCGATCAAGACGGCGACCCGCTTCAAGCACGCACCGCTCAACACGTACGTGTCGTTCAGCCACACGCCCGCCGGACAGGACGACAGCGACTGCACGCTCGGCGATGCGCTTCCGGGCCCCGGCGTCGACGACCCGGTCGTCTGCGTCATCTCGACGGAGGAACTCCAGAGCCTCGTCTTCTGCCTCGGCACGGGGCTGTCGCCGCTCGAGAGCGACGCGCTCCGGCTCTATCTCGAGGGCAACTCCTACGAGGAGATGGCCGAGGATCTCGGCTGCGACACGAAGACGATCGACAACGCTCTCCAGCGCGTGAAGCGGAAGGTGCTCCAGCATCAGCAGGAGCGCCAGGTCATCGATTAG
PROTEIN sequence
Length: 221
MSRRQLATARPLEKTQRELEDLRLVLRARNGDDVALDALVRRYTGFVRLKASSYFLAGGESDDLIQEGLIGLYKAVRDFRTDKETSFRSFAELCITRQIITAIKTATRFKHAPLNTYVSFSHTPAGQDDSDCTLGDALPGPGVDDPVVCVISTEELQSLVFCLGTGLSPLESDALRLYLEGNSYEEMAEDLGCDTKTIDNALQRVKRKVLQHQQERQVID*