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PLM1_30_coex_sep16_scaffold_17380_2

Organism: PLM1_30_coex_sep16_Actinobacteria_68_7

near complete RP 43 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 813..1358

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 modulation protein / SSU ribosomal protein S30P Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVJ5_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 187.0
  • Bit_score: 192
  • Evalue 2.40e-46
sigma 54 modulation protein/30S ribosomal protein S30P similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 187.0
  • Bit_score: 192
  • Evalue 6.80e-47
Tax=RBG_13_Actinobacteria_63_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 188.0
  • Bit_score: 199
  • Evalue 2.80e-48

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Taxonomy

RBG_13_Actinobacteria_63_9_curated → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 546
GTGAGACTTCAGGTCAAGGGCAAGAACGTCGACGTAACCGACTCGCTCAAGGACTACGCCCTCCAGAAGCTCGGGAAGCTCGAGAAGCACCTGAACGACGCAGCCCGCCTCGAGCTGGAGCTTCACGTCGAGAAAAACCCTTCGATCTCCCAGAACCAGGTTGCCGAGGCGACGGTCTGGACGAAAGGCCCGGTGCTCCGCGCGCGCGAGAGCTCGACCGACATGAAAGCCTCGATCGACCAGCTCGTGGAGAAGCTCGAGCGGCAGGCGCGGCGCTACCGCGACAAGCGGCGGCGCGGCCCCTCCAGGGGAAACAACGACCAGGGAGTCGAAGGGATCCCGGTCGTGCCGTCGGAGGAGACCCCCGTGATCGTCAAGACGAAGCAGTTCGCGATCAAGCCGATGACCCCCGAGGAGGCCGTCCTCCAGCTCGAGCTAATCGGCCACGATTTCTTCGTCTTCCAGAACGCCGACACGAACGACGTCAACGTCGTCTACCGGCGCCGCGACGGGAACTACGGGCTCATCGAGCCCCGAGTCACCTGA
PROTEIN sequence
Length: 182
VRLQVKGKNVDVTDSLKDYALQKLGKLEKHLNDAARLELELHVEKNPSISQNQVAEATVWTKGPVLRARESSTDMKASIDQLVEKLERQARRYRDKRRRGPSRGNNDQGVEGIPVVPSEETPVIVKTKQFAIKPMTPEEAVLQLELIGHDFFVFQNADTNDVNVVYRRRDGNYGLIEPRVT*