ggKbase home page

PLM1_30_coex_sep16_scaffold_23544_2

Organism: PLM1_30_coex_sep16_Actinobacteria_68_7

near complete RP 43 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 808..3405

Top 3 Functional Annotations

Value Algorithm Source
Patatin Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EDM1_CHLL2 similarity UNIREF
DB: UNIREF100
  • Identity: 33.2
  • Coverage: 548.0
  • Bit_score: 238
  • Evalue 2.40e-59
patatin similarity KEGG
DB: KEGG
  • Identity: 33.2
  • Coverage: 548.0
  • Bit_score: 238
  • Evalue 6.80e-60
Patatin {ECO:0000313|EMBL:ACD90646.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium limicola (strain DSM 245 / NBRC 103803).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.2
  • Coverage: 548.0
  • Bit_score: 238
  • Evalue 3.40e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chlorobium limicola → Chlorobium → Chlorobiales → Chlorobia → Chlorobi → Bacteria

Sequences

DNA sequence
Length: 2598
GTGACGGAGAGGGCGGACGCCATCCCGGGCGCGGCCGCCCCCACGATCAGCCCCCCGCCGGTTATCGGCGACATCCGTGAGGTCCGCTTCGCCGTCGTGTTGTACGGCGGCGTTTCGTTGGCCATCTACATGAACGGCGTGGCGCAGGAACTCCTCCGCATGGTCCGGGCGACAGCCCCCGCGGGTCTCGAGGGAAGCGAGCGAACCCACGGCCTCCCGGTGCCGGAGCTCACGGGGTCCGAGAAGACCTACCGGAAGCTCGGACAGCTCACCGACACCGACTCGGAACCACCCGACGACGCCGAACGCCCCCTCGTCCGGCGGTTCGTCATCGACATCATCTCCGGGTCCTCCGCCGGCGGCATCAACGGCGTCTATCTCGCGAAGGCCCTCGCCAACCGTCAGGAGATCAAGGCCCTGGAGGCGATGTGGGTCGAGGAGGGCGACATCGCGATGCTCCTGAACGACAGAGGGTCGCTCGAGGGGTTGCGGCAGTCCACGGTGTCGCCCTACGCGGATCAGATCGACCTGTACGTCACCGCCACCGACCTGCAGGGCCTCCTGCTCCCGCTGCGGATCGCGAACGGCATGGTGATGGAGAAGCGGCATCGCAACGTCTTCCACTTCCGGTACGCCACGGAAGGCGTTCGAGGGGAACAGATCAACGAGTTCCAGGCCGGGAACAACCCGTTCCTGGCGTTCGCGGCTCGCTGCACGTCCTCGTTCCCGTTCGCCTTCGAGCCGATGGTCCTGTCCAGGATCGACGACGACCTCGCGGACTTCACCCGCTATCCCACACAGCGGTATGGAGCCGACTCGCCGGAGTGGCCACGTTTCTTCCGCGACTACCTCGCCCTTCCCCAGGATCTTCCCGTGGGTGCCGGCGACGCGACGGATGGGGATTCGCGAGACTTGCTCACGGCGCGCTTGCCGTTCAAGGACCGCCAGTTCGGCGACGGAGGATCCCTCGACAACAAGCCGTTCACCTGGGCGACGAGCGAGCTCCTTCGGCGGCGAGCCAACAACCCCGTTGATCGCAAGCTCCTGTTCGTGGAGCCGGATCCTTCGGTCCCTTCGGAACGGACGACGCTCCTCGATCCGTTGGAGAACGTGGTCGCGCAGGCTCTCCTCCTCCCGCGGGATGAGACCGTTCGCTCCGACCTCGAGGCGGTGTTGGCGAGGAACGAGGTCATCCGGCGGATGGAGTCGGTGTTGCTCTCGGTCGAGACCCGCCTGGACCCGCCGCACACCAGCGAGCCCGCCGTCTTCACGTCGTTCACGTTGAATGACGAGGCGGAGACGGTAAGTGCGACCTACGCCGCCTATCACACCCTCCGCGTCGAGGCGGTGATCGACGATCTCGCGAACCTCGCTTCCGCGGCGATGGAGTATCCGGGAGGGCCTGGATACATCCGAGCCATCCGGTACGTGTTCGACGCGTGGGTGCACGATCGCTTCCCGGACTACGCGCAGCAGGGGCCGGTGCCCGCGGGGGACACGCTGACGTCGTTCCTGTACGCGTTCGACATGCAGTATCGGTTCCGCAGGCTCGATCTGGTGAAGAAGAAGATCGACCACGTCTTCCCGCTCACGGACGCGGCCGACGTCACCGGCCCCATCCTCGATGCGGCCGGGATCGAGTTCTGGCCGGACCCGGGTTCCGAGGCGGAGAAGTCATTCCAGGCCGAGCTCCTGCGGCTCAAGGCCGCGCTCAACGAGATCGAGCACCTGGTGTTCCGGCGAGCCATGTCGGACCTTCGTCCCAGGCCCGGCAGCGACGAAGTGCGGGAGTTCCCTGAGCTCGTCGAGCGCCTGGGTCTGGACGAGCGCACGCTCCAGCGCATCCTGAGGCCGCTCGATGACCTGGAGCGCCGGCGAAGGGCGTGGACGGTCCTCGATGAGCACCGGCCGGAGTTCCGCGCGATGAGCGAGTGGCTCGAACGGCTCTTCCGCAGCCTCCGAGAGGAGGCCAACCGCTACTGGGGCGCCCAGATCGATCCGCCGGTACTTCCGTCCGATGAGCCGGTGGAGGCGGCCCGCAGGCTGGTCCAGTTGACGTGGGAGCGCTTCGAGGCCTACGACAGCGTCGCCTTCCCCATGCTCTTCGGCGCCGATGTGGGCGAAGCGGACGAGGTCGAGATCATCCGCATCAGCCCCGTCGATGCAAAGGGCCTTCGGAACGTCGAACGGCCCGGAACACCCCAGAAGGTCGCAGGGTCGAAGTACGGCCACTTCGGAGGCTTCCTGGATGAGCAATGGCGGAAGAACGACATCCTGTGGGGTCGGCTGGATGCCGCGGAGCTCCTGGTCAGCGTGCTGGTCCCGGTGAAGCAGAGGAACCGAGGAGAGGTGGTGGAACGCCTTCGCAAGGAGGCGCAAGCCGAGATCATCCGTGAGCACTTCACCGCGGAGCAGCGAGCCATCATCGCTCGACGGCTCATGGACGAGATCGCCGGCCTCCAAGAACCCATGCCGACGGATGCGGCAGGGGTCGGCGAGCTCGCCGAACGCTACGGCGCGGATCGAAATCTCCGGACGATGTTCGAAGTCCTCGTCACGGACGACGATCGGTTGCTCGAGGCGTTCGCGCGCACCTAC
PROTEIN sequence
Length: 866
VTERADAIPGAAAPTISPPPVIGDIREVRFAVVLYGGVSLAIYMNGVAQELLRMVRATAPAGLEGSERTHGLPVPELTGSEKTYRKLGQLTDTDSEPPDDAERPLVRRFVIDIISGSSAGGINGVYLAKALANRQEIKALEAMWVEEGDIAMLLNDRGSLEGLRQSTVSPYADQIDLYVTATDLQGLLLPLRIANGMVMEKRHRNVFHFRYATEGVRGEQINEFQAGNNPFLAFAARCTSSFPFAFEPMVLSRIDDDLADFTRYPTQRYGADSPEWPRFFRDYLALPQDLPVGAGDATDGDSRDLLTARLPFKDRQFGDGGSLDNKPFTWATSELLRRRANNPVDRKLLFVEPDPSVPSERTTLLDPLENVVAQALLLPRDETVRSDLEAVLARNEVIRRMESVLLSVETRLDPPHTSEPAVFTSFTLNDEAETVSATYAAYHTLRVEAVIDDLANLASAAMEYPGGPGYIRAIRYVFDAWVHDRFPDYAQQGPVPAGDTLTSFLYAFDMQYRFRRLDLVKKKIDHVFPLTDAADVTGPILDAAGIEFWPDPGSEAEKSFQAELLRLKAALNEIEHLVFRRAMSDLRPRPGSDEVREFPELVERLGLDERTLQRILRPLDDLERRRRAWTVLDEHRPEFRAMSEWLERLFRSLREEANRYWGAQIDPPVLPSDEPVEAARRLVQLTWERFEAYDSVAFPMLFGADVGEADEVEIIRISPVDAKGLRNVERPGTPQKVAGSKYGHFGGFLDEQWRKNDILWGRLDAAELLVSVLVPVKQRNRGEVVERLRKEAQAEIIREHFTAEQRAIIARRLMDEIAGLQEPMPTDAAGVGELAERYGADRNLRTMFEVLVTDDDRLLEAFARTY