ggKbase home page

PLM1_30_coex_sep16_scaffold_21827_4

Organism: PLM1_30_coex_sep16_Actinobacteria_68_7

near complete RP 43 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(2288..3793)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Streptomyces violaceoniger RepID=UPI0003C74A44 similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 457.0
  • Bit_score: 252
  • Evalue 7.10e-64
Ricin B lectin {ECO:0000313|EMBL:KJK56154.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.8
  • Coverage: 489.0
  • Bit_score: 246
  • Evalue 7.10e-62
ricin B lectin similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 418.0
  • Bit_score: 232
  • Evalue 2.20e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Saccharothrix sp. ST-888 → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1506
ATGAAGCTCGCCGTCGCAATCGCCCTTCTCTGCCTGCTGGCGGCAGGTGCGGGCGCAGCCTACGGTCACGAGGAGAGCCCGCGCGGGAACGCGGCTCGCGGCGTCGTTCTCACGGGACTCTCGCGCGCCCGACCGGATGGCCCTTGTAAGACTGGATTCGAGCTGCGCCTTCCCGACGGTCGGGTCGGTTGCACGCACGGGCCCGACCCTGCGCCGGCCGGCCGCGACGTCCGTAAGGCGCGGTCGCTCGGTGACATCGCCGCCATGACGAGCGGAGATCCCTCGGGGACCGCGACGGCCTACGGCCAGATCTTCTGTACCGGCGACGGTGTCGACGGCAACCGGGTTCAGGCGGTCTATGCCTATCCGGCGGGCGGGCGGGACAACTACGCCGCGGTCGCGCCGTATGTCCGCCAGTGGGCCGCGCAGGCTGACCAGGTTCTGAACGACAGCGCCGCCGAGACCGGAGGGGTGCGCCACGTTCGCTACGTCACCGACGCGAGTTGCCAGGTCGACGTGACCAAGGTGGCGCTCAACGGCAGTGGCCTCGCGAGCCTCGCCGGCACGGCAGGCGAACTCGCCGCGCAGGGCTTCGACAGGCCCGACCGCAAGTACCTCGTCTGGGTCGACGCCTACAAGTACTGCGGCGTCGCCACGGTCGAGCCGGACGACCGGCCCGGCCAGAACAACGCGAACAACGGCAGCGGCAGCCCCGGAATGGTCGCCCGCGTCGACCGCGGCTGCTGGGGCATGCCTTCCGATTCGGCCGAGGCCCACGAGCTCACCCACATCCTCGGGGGAGTGCAGCCGACGGCCCCGCGCGGCACGTGGAACTACCACTGCAGCGACGAGTCGGAGCTCATGTGCTACGACGACGACTCCACGGCGGACGGCTACGTCGGGTCGCACGGGCGGCTCGTTCCGCTCGTCTACGTCTGCCCGAGGTCGCACGAGCGGCTGCTCGACTGCGGAGGCGACGACTACTTCTCGACGAATCCCGATCCGAGCGGCTGGCTCGCCCAGCACTGGAACGTCGCCAACTCGAGCTTCCTGACGAGCGAGGGGCCGCCCAGCGTTCCCGACAGCACCGCCCCGAGGGCGACTGCTCCGAAGATCAGCGTCGAAGGCCGCCTCACACGAAGGGTGCCCGTCCGCCTGCGCTGGACCTCGAAGGACCCGGACGCTGTCGGCTTCTGGCTTTGGAGAAGCGTCGACGGGCGTTCGTGGAGGTACGTCGAGCGTCGCGACCTATGGCGGAACGAGGCCCTCTTCCATCTACGCCGCGGCCACTCGTATCGCTTCCTCGTCCACGCCTTCGATGCGGCGGGCAATGCGAGCCCCGCCGCGATCGGCCGGCCCGGCATGTCGCCTCGCCGCGAAGCGTCGAAGCGCGCTCGAGGCTCGTCTTTCGTGGGAAGGCGATCGCGCTGGTATCGCCGACATCTCGCGGCGGCGGCCGGGCTCGAATCTTCATCGACGGCCGCTACGCGGGCACTATCGACCTGA
PROTEIN sequence
Length: 502
MKLAVAIALLCLLAAGAGAAYGHEESPRGNAARGVVLTGLSRARPDGPCKTGFELRLPDGRVGCTHGPDPAPAGRDVRKARSLGDIAAMTSGDPSGTATAYGQIFCTGDGVDGNRVQAVYAYPAGGRDNYAAVAPYVRQWAAQADQVLNDSAAETGGVRHVRYVTDASCQVDVTKVALNGSGLASLAGTAGELAAQGFDRPDRKYLVWVDAYKYCGVATVEPDDRPGQNNANNGSGSPGMVARVDRGCWGMPSDSAEAHELTHILGGVQPTAPRGTWNYHCSDESELMCYDDDSTADGYVGSHGRLVPLVYVCPRSHERLLDCGGDDYFSTNPDPSGWLAQHWNVANSSFLTSEGPPSVPDSTAPRATAPKISVEGRLTRRVPVRLRWTSKDPDAVGFWLWRSVDGRSWRYVERRDLWRNEALFHLRRGHSYRFLVHAFDAAGNASPAAIGRPGMSPRREASKRARGSSFVGRRSRWYRRHLAAAAGLESSSTAATRALST*