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PLM1_5_b1_sep16_scaffold_1453_2

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 1504..2403

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CNU4_SYNLT similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 275.0
  • Bit_score: 217
  • Evalue 1.50e-53
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 275.0
  • Bit_score: 217
  • Evalue 4.30e-54
Tax=RBG_16_Actinobacteria_67_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 271.0
  • Bit_score: 232
  • Evalue 4.90e-58

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Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGAGCATCGACCTTATGAACCGGCAGTTCGATCGAACGTACGACAGGACATCAAGCGAAGCTGACTCGAGCTACGAGCTCGAGGACTCATTGACGCTGTACGCCCGCGGAGTAGACCGGGTGCCGATGCTGTCTCGGGCTGAAGAGCGTGAGCTCTTCCGTCGTAAGGAAGCCGGAGACGAGCGTGCGAAGCGGATTCTGATCGAGGCCAATCTGCGTCTGGTCATCTGGATCGCCCGTCAGTACGCGCATCACAACGTTCCGTTGCTCGACCTCATCCAGGAAGGGAATCTGGCACTCACGAGGGCGGTCGAGAGGTTCGATCACCGATCGGGTTTCAGGCTCTCGACCTACGCCACCATGATGATCAAGGCGGCGGTCGGGCGAGCGGCGGAATGTCACGCGCGTTTGGTTCCGGTTCCGATTCACGTCGGGAGGCAGATCCGCACCGTTCGGAGAGCGCGTCAGGTTCTCCTGGAGCGCTTGAATCGCGACCCCTTGCTGAACGAGATCGCTGCTGAAGCAGGACTCGATGCCCTCCGCGTCGGGGAGTTACTCGGCTACGAGCAGCAGCCCCTGAGTCTCGAGTCCCCTCCGAGAGAGGGGCAACAGGCGTACAGGGAGCTGCTCACGGATCCGACATCAGCCCATCTGGACTCGGCACTGGCCGAGCGCCAGCGAAGAGAGGAGGTTGAGGCAACCGTCAACTCGCTCGACGAGCGCCTCCGGCTCGTACTCAGGCTGCGCTTCGGTCTCGCGGGGCAATCACCCCGGTCGCTGGTCGAGGTGGGGAGGGAGCTGGGAGTGACAAGCGAGCGGGCTCGCCAGCTCGAGGCGACGGCACTCGACAAACTCCGAACGCTCGCGCCGGGTCTGCGGGACTATCTTGAGGTTGCCTAA
PROTEIN sequence
Length: 300
MSIDLMNRQFDRTYDRTSSEADSSYELEDSLTLYARGVDRVPMLSRAEERELFRRKEAGDERAKRILIEANLRLVIWIARQYAHHNVPLLDLIQEGNLALTRAVERFDHRSGFRLSTYATMMIKAAVGRAAECHARLVPVPIHVGRQIRTVRRARQVLLERLNRDPLLNEIAAEAGLDALRVGELLGYEQQPLSLESPPREGQQAYRELLTDPTSAHLDSALAERQRREEVEATVNSLDERLRLVLRLRFGLAGQSPRSLVEVGRELGVTSERARQLEATALDKLRTLAPGLRDYLEVA*