ggKbase home page

PLM1_5_b1_sep16_scaffold_2047_16

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 10796..11875

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F915_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 31.0
  • Coverage: 284.0
  • Bit_score: 101
  • Evalue 1.50e-18
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 284.0
  • Bit_score: 101
  • Evalue 4.10e-19
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 154.0
  • Bit_score: 157
  • Evalue 1.80e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
GTGGCGACCGCAGCGCCAGAGATCCCGGTCCTAGCTCGAGATCAGGCCTTCGAGTCTCTCTACCGACGATACGTCAAAGACGTCTATCACTACGCGCTCGCGCTTCTGCGTAATCCCACCGACGCGGAGGATCTGACTCAGACGACGTTCCTGAACGCGTACCGCGCGTACGTCAAGGGCGTCGAGATCGAGAAGCCTCAGAACTGGTTGATCAAGATCGCGCACAACGTTGCGCGCACCCGCTATGCGCGGGCGAGCCGTCGGGTCAGGGAGGTTCCGCTCGAGGATCATGTCGACCTGATCGCAGTGCCGGAAGAAGATCGGCCTGACCTGCAGGGCGTCCTGGACGCGCTCGGGCGACTGCCGTTCAACCAACGCTCCGCGCTCGTCCTGCGCGAGCTCGAAGGTCGCTCGTACGCCGAGATCGCCGACACGATCGGGGTTTCGGTCTCTGCAGTCGAGACATTGATCTTCCGCGCCCGTCGGTCGTTGCGGCTCAAGGCCTCTGCGCTCCGGTCGCTTGTCGTGGTGCCGCTGCCGACATCGCTGACGCAGTTCTTCGATACGGGCGGTGTGGTCGCCGGGGGCGGCGCGGTGGCGGGCGGTGGGCTGCTCGTGAAGGCGGCGGTCGCGATCTTTGCCGGCGCTCTCGCTACCGGCATCAGCAGCGATCGCAACGGTCCCGCCTCGGCGGCACCTCCCTCGACACAGCGGATCGCCGCCCCTTCGTGGCAGCTTGCCGCCGTCTTTCCGACGCGCGGGGTTCGCGCCGCGAGCGCCCCGAGAGGCGCCCGGGCCCCGGCAGCGAAGACGGGGCGGGCAGGGGCGAAGGGGATTGGGGTCGGTTCGCAGCGCGCCGGCGAGCTGGGGCTGGGGCCACAGCCAAGCGGTCAGCCCTTGGCCCAGGCGCCGGCAGGCTCTGCCCCCAGTGCGACGATCAAGTCGAGCCCGCTCACCCCGGTCTCCCAGATGACTGACCAGGCCGTGAGCCTGGTCGGAGAGGCTCAGAAGGCGCTCGAGCCCCCCGTCGCGTCAGGGGGACGCAAGATTCCCGCCGAGCGGGTATCTACTAGAGCATGA
PROTEIN sequence
Length: 360
VATAAPEIPVLARDQAFESLYRRYVKDVYHYALALLRNPTDAEDLTQTTFLNAYRAYVKGVEIEKPQNWLIKIAHNVARTRYARASRRVREVPLEDHVDLIAVPEEDRPDLQGVLDALGRLPFNQRSALVLRELEGRSYAEIADTIGVSVSAVETLIFRARRSLRLKASALRSLVVVPLPTSLTQFFDTGGVVAGGGAVAGGGLLVKAAVAIFAGALATGISSDRNGPASAAPPSTQRIAAPSWQLAAVFPTRGVRAASAPRGARAPAAKTGRAGAKGIGVGSQRAGELGLGPQPSGQPLAQAPAGSAPSATIKSSPLTPVSQMTDQAVSLVGEAQKALEPPVASGGRKIPAERVSTRA*