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PLM1_5_b1_sep16_scaffold_2172_7

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 5987..7054

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter substrate-binding protein Tax=Patulibacter americanus RepID=UPI0003B57091 similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 331.0
  • Bit_score: 266
  • Evalue 2.60e-68
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 358.0
  • Bit_score: 260
  • Evalue 5.20e-67
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ADP85006.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 358.0
  • Bit_score: 260
  • Evalue 2.60e-66

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
GTGAAAAGATTCTCTCGCCGGTGGGCGTCAGTGGGGCTCGTCCTCGTCCTGGTCGGCGTTGGCGCGACGATTGCCGTCACCGGCGCAACAGCGAAGAGCTCCGCGAACATCCAGGTCTGTGTCCTCCTTCCGGACACGAAGTCATCCGTACGCTGGGTGCAGTTCGACGCACCGTACTTCGCCAAGGCGTTGAAGAAGGCCAAGGTGACGTACTCGATCACGAACGCACTGAACGACCCGCAGAAGATGGTCTCTCAGGCCGATTCGTGTCTGTCTCGCGGGGCGAAGGTGGCCATCGTCACCGACATCGCCCAGGGCACGTCGATCGCGATCGAGAAGAAGTTCGCGAAGGCGGGCGGCTATTCGATCGACTACGACCGTCAGGTGGTCGGCGGCATCGCGAAGGTGTACGTCTCTTTCGACGGTAAGGCCGTCGGCGCCGCCCAGGCCAGGGGTGTCGTCAACAAACTGAAGGGCAAGTCGAAGCCCGTCGTCGCCGAACTCTGGGGCGGCCCGACGGATCAGAACGCGTTCTGGTTCAAGAGCGGCAACGACGCCGTTCTGAACCCGCTCTTCAAGAGCGGCAAGCTGACCAAGGGCCCGCAGCAGTTCGTGCCGCTCTGGCTGGCGACGAACGCGCAGCCGATCTTCGAGCAGATGCTGCTGAAGACGAACAACAAGATCGACGGTGCCATCGCGGCGAACGACGGCATCGCAGGCGCTGTGATTGCCGCCCTGAAGGCGAAGAAGCTGAAGCCGATCGCGTTGTCGGGGCAGGATGCGACCGTGCAGGGCGTCCAGAACATCATCTCGGGCTGGCAGACGATGACCGTCTACAAGTACGTGCCGCTCGAGGCCAACGCAGCCGCGGCGGCGGCTGTCGCGCTGCTGAAGCACAAGAAGGTGCCCGGGGTCAACGGGTTCCGTAAGAACGGCAGCAAGAAAGAGCCGACCGTCCAGATTCCGGTCGTCTCGATCACGAAGGCCAACTACACGAGGCTCTTCAAGGACAAGTTCCTGAAGAAGAGCGACGTGTGCGTCGGCGAGTTCGCGCAGTTCTGCAGTTAA
PROTEIN sequence
Length: 356
VKRFSRRWASVGLVLVLVGVGATIAVTGATAKSSANIQVCVLLPDTKSSVRWVQFDAPYFAKALKKAKVTYSITNALNDPQKMVSQADSCLSRGAKVAIVTDIAQGTSIAIEKKFAKAGGYSIDYDRQVVGGIAKVYVSFDGKAVGAAQARGVVNKLKGKSKPVVAELWGGPTDQNAFWFKSGNDAVLNPLFKSGKLTKGPQQFVPLWLATNAQPIFEQMLLKTNNKIDGAIAANDGIAGAVIAALKAKKLKPIALSGQDATVQGVQNIISGWQTMTVYKYVPLEANAAAAAAVALLKHKKVPGVNGFRKNGSKKEPTVQIPVVSITKANYTRLFKDKFLKKSDVCVGEFAQFCS*