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PLM1_5_b1_sep16_scaffold_2195_6

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(3392..4000)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGI9_THEM7 similarity UNIREF
DB: UNIREF100
  • Identity: 38.2
  • Coverage: 199.0
  • Bit_score: 125
  • Evalue 4.00e-26
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 199.0
  • Bit_score: 125
  • Evalue 1.10e-26
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADU50535.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.2
  • Coverage: 199.0
  • Bit_score: 125
  • Evalue 5.70e-26

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Taxonomy

Thermaerobacter marianensis → Thermaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 609
ATGCAACTGCCTTCCGGCCGCCGCCGTCCAATCCAGCAGTCCTCCCGTTCCGAAGGGCCCCTCGTCTACGCGCGGCTGAGCGATCCGATCCTGGTGAAACGAGCAAAAGACGGCGATGCGCAGGCACTGGCGGCCCTCTGCGAGCGGCACGCTCCACGCGTTGAAAAGCTGGCCGGCCATCTGCTCCGCGATCCTGAAGATGCGCGGGACGCGGCTCAGGAGGCGCTCGCAAAGCTCTGCGTCAAGATCAAGCAGTTCCGCGGGGAGTCCCAGTTCGCGACGTGGCTCCACCGGTTGACGATCAACGCCTGCCGCGACGTCGCAAACCGGCAGCGGGCGCGTGCCTGCGAGCCGCTGCTCGAGGATCGCCGCGCCGCCACCGATGCGGATCCGGCGCGCGAGGCCGACCGCGCGGAGTTGCGGAGCGAGCTGAACCGCTGCCTCGCGGAGATCGCGCCGGAGCAGGCGCGCGTCGTCGTGTTGAAGGACGCGCTCGGTCTCTCCTTCGAGGAGATCTCCGAGGCCGCGGGGATGCCGGTCGGAACGGCCAAGTGCTACGCCCATCGTGGCCGCAACCGCCTCCGCGACAAGCTCTCGGACGTCGCGTGA
PROTEIN sequence
Length: 203
MQLPSGRRRPIQQSSRSEGPLVYARLSDPILVKRAKDGDAQALAALCERHAPRVEKLAGHLLRDPEDARDAAQEALAKLCVKIKQFRGESQFATWLHRLTINACRDVANRQRARACEPLLEDRRAATDADPAREADRAELRSELNRCLAEIAPEQARVVVLKDALGLSFEEISEAAGMPVGTAKCYAHRGRNRLRDKLSDVA*