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PLM1_5_b1_sep16_scaffold_3828_2

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 936..1778

Top 3 Functional Annotations

Value Algorithm Source
DNA repair photolyase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q117_9FIRM bin=16ft_combo_ws3_JS1 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 280.0
  • Bit_score: 372
  • Evalue 3.40e-100
Radical SAM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 288.0
  • Bit_score: 226
  • Evalue 8.60e-57
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 280.0
  • Bit_score: 372
  • Evalue 4.80e-100

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 843
ATGGGCTTCAAGTGGTCGTTGAACCCCTACATGGGTTGCGTGCACCGCTGCACCTTCTGTTACGTCAGGGCGTTCGAGCAGAGGTCTGACCGACCGTCGGACGACCGGTACGGGACCTCGATCCGCGTGAAGACGAACATCGCCGAGGTCTTGCGCAAGGAGCTCGCGCGCTCCACGTGGCGGCGCGAGCAGGTGACGGTCGGAGCTGCGACCGATCCGTACCAGCCCGTCGAAGGCAAGTACAAGCTGACGCGCGCGTGTCTCGAGGTGTTCCGCGACGCCGCGAATCCGTTCGGGATCATCACGCGAGGGCCGATGATCGTGCGCGACCTCGACGTGCTCGTGGAAGCGGCCGGACGCGCGGAGGTCGCCGTCACGTTCTCGATCCCGACGCTCGACGAGGATGTCTGGAAGCGGACCGAGCCGTCGACCGCTCACCCCCGGCAGCGGTTGCGGGCCCTGAAGGCGCTCGTCGACGCCGGCGTCAAGGCGAGCGTCGGTATGGCACCGATCCTCCCGGGGATCTCGGACCGACCCGAGCAGCTGCGCGCAGTCGTTCGGGCCGCGCGGGAGGCCGGAGCCACCGGAATCTGGGCCAACCTGCTCTTCCTGCGGCCGGGGACGCGTGAGCACTTCCTCGAACATCTGGCCGAGGACTGGCCCGAGCAGCTTCCTCTGTACGAGCGCCTCTACGCCCGCCGCCGCGCCTACCTGGGCGCCGAGGAGCGGAACCCGCTCCGGGCCGAGGTCTCGAAACTCGCCCGGGAACAGGGCATCCGGGACCGCCGCAAGGTCCGCCTAGGCCCGCCGCCGGAGCCCGAGCAGCTTTCGCTGACCGTATAG
PROTEIN sequence
Length: 281
MGFKWSLNPYMGCVHRCTFCYVRAFEQRSDRPSDDRYGTSIRVKTNIAEVLRKELARSTWRREQVTVGAATDPYQPVEGKYKLTRACLEVFRDAANPFGIITRGPMIVRDLDVLVEAAGRAEVAVTFSIPTLDEDVWKRTEPSTAHPRQRLRALKALVDAGVKASVGMAPILPGISDRPEQLRAVVRAAREAGATGIWANLLFLRPGTREHFLEHLAEDWPEQLPLYERLYARRRAYLGAEERNPLRAEVSKLAREQGIRDRRKVRLGPPPEPEQLSLTV*