ggKbase home page

PLM1_5_b1_sep16_scaffold_1077_10

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(7453..8499)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA01_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 360.0
  • Bit_score: 312
  • Evalue 5.20e-82
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 360.0
  • Bit_score: 312
  • Evalue 1.50e-82
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 347.0
  • Bit_score: 370
  • Evalue 1.70e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
ATGGTCGTCGACGAACGCCTACAAGCGCTGCTGGAACAGGGAGAGGAAGCCGGCTGCCTCAATCTCTCCGCGGTCAGCGAGTTCCTGCAGGAGGCCGACCTCGACGACGACCAGACGACCGGGTTCTTCGAGCAACTTCAGGAGCGCGGCATCGACCTGACCGACGATTGCGCCCGTCCCGACGCAATCGGGAGCACGTACGTGAACGGCGACCTCGCCGTCGCCACCACCGACGCCTTGCAGCTCTTCCTGAACGAGGCCGGCCGCTACAAGCTGCTCACCGCCCCGGAGGAGGTCGAGCTCGCGAAGCGCATCGAGCGCGGCGACAAGGAGGCGAAGGACCTCATGATCAACTCGAACCTCCGCCTCGTCGTCTCGATCGCGAAGAAGTACCAGGGCCACGGCATCTCGCTCCTCGACCTGATCCAGGAGGGAATCATCGGGCTGATCCGCGCGGTCGAGAAGTTCGACTGGCGCCGCGGCTACAAGTTCTCGACCTACGCGACGTGGTGGATCCGGCAGGCCGTGCAACGGGGCGTCGCGAACAAGTCGCGCACGATTCGGATCCCGGTTCACATCGTCGAGCGCGAGCAGAAGATCTCGCGGGCCGAACGCGCGTTGATGGCCAAGCTGGGACGCGATCCGAGCGACGATGAGGTCGCCGAGGTCGCGAAGCTCTCGCTGAAGCACGTTCAGGAGGTGCGCGCCGCGGCACGAGCCGTGACCAGCCTCGACAAGCCGGTCGGCGCCGAGGGCGATGCGAGCTTCGGGGATCTCATCGCCGGCGAGGACGTCGAGCCCTCGGAAGAGGTCCACGTGAGCCTCGCCGAGACCGCCGTCCGCGACGCGGTCGAGACCCTGCCCGAACGCGAGCGCGAAGTCGTGAAGCTTCGCTACGGGATGGACGGCGACCCCGATCCGAAGTCGCTCGAGGAGATCGGCCGCACGCTCGGATTGACGCGCGAGCGCGTGCGCCAGATCGAGACGCGAGCGCTACAGCGGCTGGCAGAGCGCCGCGAGGTGGCCGCGCTCGGCGAAACCGCCTAG
PROTEIN sequence
Length: 349
MVVDERLQALLEQGEEAGCLNLSAVSEFLQEADLDDDQTTGFFEQLQERGIDLTDDCARPDAIGSTYVNGDLAVATTDALQLFLNEAGRYKLLTAPEEVELAKRIERGDKEAKDLMINSNLRLVVSIAKKYQGHGISLLDLIQEGIIGLIRAVEKFDWRRGYKFSTYATWWIRQAVQRGVANKSRTIRIPVHIVEREQKISRAERALMAKLGRDPSDDEVAEVAKLSLKHVQEVRAAARAVTSLDKPVGAEGDASFGDLIAGEDVEPSEEVHVSLAETAVRDAVETLPEREREVVKLRYGMDGDPDPKSLEEIGRTLGLTRERVRQIETRALQRLAERREVAALGETA*