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PLM1_5_b1_sep16_scaffold_973_25

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(17826..18752)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor bin=bin9_gal15 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15 similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 304.0
  • Bit_score: 278
  • Evalue 7.40e-72
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 303.0
  • Bit_score: 275
  • Evalue 1.00e-71
Tax=RBG_16_Actinobacteria_67_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 319.0
  • Bit_score: 349
  • Evalue 4.80e-93

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Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGCGGCCGCTCCCTGAGGTGCCATCGGACCCCGCGCTCGAACCAAGGCTCGAGCTCGTTCCCGAGGTCGAGAACGCCGAGGCCGAGGAGGCTGAGGAGACCGAGGAAGAGACCGAAGCCGCCGAGACGGAGGATGGGGAGGACGACGCCGCCCCGGCCGCCAAGGCCGAGGCGACCCAGGATCCGCTGAAGCTCTACGTCCGGGGCGACGAGTGGGCCAAGAAGAAGCTGATCGAGTCGAACCTCCGGCTCGTCATGTCGATCACGCGTAACTACACGAAGGCCGGAGTGCCGCTGCTGGACCTGATCCAGGAGGGCAACCTCGGCCTCATCCGTGCGGTCGAGAAGTTCGACTACAAGCTCGGCTACAAGCTGTCCACCTATGCAACGTGGTGGATCCGGCAGGCAGTAACGCGCGCGCTCGCCGACCAGGGCCGAACGATCCGGCTGCCGGTCCACGGCGCGGACCAGGTCCGACGGCTCATGCGCGCGCGCCGTCAACTCGCCCAGAAGCTGAACCGCGAGCCGACGCAGGAAGAGCTGGCAAGGGAGAGCGGCTTTCCCGAGAAGCGCGTCCAGGAACTGCTCGACCTCGTTGAGGATCCTGTCAGCCTCGAGACCCCGGTCGGCGAAGGCGAGAGCATGTACGCCGACCTGATCGAAGACATTCACTCGGAACGCCCCGACGAGTCCACGTCGAAGAAGCTCCGCCGCGTCGAGCTCGCCGAGGCGATGCTCCGGTTGAACCCGCGCATGCGTCGCGTGCTCTCCCTCCGCTTCGGGCTCAATGGCGAGGCTCCCCAGACCCTGGAAGAGGTCGGGGCGGGGCTCGGCATCACACGGGAGCGCGTGCGGCAACTCGAGTCACGCGCACTTCGAGAGCTCCGGGCCGTCGCGCCCGACCTCGAGCTCTACCTCCGCAGTTAG
PROTEIN sequence
Length: 309
MRPLPEVPSDPALEPRLELVPEVENAEAEEAEETEEETEAAETEDGEDDAAPAAKAEATQDPLKLYVRGDEWAKKKLIESNLRLVMSITRNYTKAGVPLLDLIQEGNLGLIRAVEKFDYKLGYKLSTYATWWIRQAVTRALADQGRTIRLPVHGADQVRRLMRARRQLAQKLNREPTQEELARESGFPEKRVQELLDLVEDPVSLETPVGEGESMYADLIEDIHSERPDESTSKKLRRVELAEAMLRLNPRMRRVLSLRFGLNGEAPQTLEEVGAGLGITRERVRQLESRALRELRAVAPDLELYLRS*