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PLM1_5_b1_sep16_scaffold_4374_3

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(1482..1799)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 Tax=Patulibacter americanus RepID=UPI0003B5C1FE similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 114.0
  • Bit_score: 86
  • Evalue 1.40e-14
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 115.0
  • Bit_score: 83
  • Evalue 2.60e-14
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 105.0
  • Bit_score: 93
  • Evalue 1.20e-16

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 318
GTGGCGAACGAGCTCGAGGAAGAGGACCTGATCGAGCTCCGCGCGGAGCTCGAGGAAAAGGGCATCGAAATCGTCCCTCACGAGGACGACACGCCGGCACCCCGCGTGCGGGCTGCTGCAGCAGAGATTTCCGGAACGACGGACAGCCTGACGCTGTTCATGAACGCCGCCGGTCGATATCAGCTGCTCACCGCCGCCGAGGAGGTCTCGCTCGCCAAGCGTGTCGAGCGCGGTGACCGCGCTGCCAAGGAGCGGATGATCAATTCGAACCTCCGGTTGGTGGTCTCGATTGCAAAGCGCTACCAGGGGGCGATCTGA
PROTEIN sequence
Length: 106
VANELEEEDLIELRAELEEKGIEIVPHEDDTPAPRVRAAAAEISGTTDSLTLFMNAAGRYQLLTAAEEVSLAKRVERGDRAAKERMINSNLRLVVSIAKRYQGAI*