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PLM1_5_b1_sep16_scaffold_6417_1

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 176..1099

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA01_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 296.0
  • Bit_score: 333
  • Evalue 1.50e-88
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 296.0
  • Bit_score: 333
  • Evalue 4.20e-89
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 250.0
  • Bit_score: 377
  • Evalue 9.60e-102

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 924
GTGAGCGCAACCGAGGCCGTCGCACCACCGAAGACCGTCGTCGACTTGCTCGAGACGGACGATGCAAAGGCGCTGCTCGACGCAGGGAAGGAACACGGGCAGCTCAGTGCCGACGAGATCGCCGTCGCGCTCGACGAGCTCGACCTCGAGCCGGGGCAGATCGACGACTTTTACCACGCGCTCGAGGAGCTCCACATCGAGGTCGTCACCGGCGTCGAGGAGGAGCAGGAAGCTGTCGAAGAGCCGCGCGAGGTCTCGACCGACGCGCTGCAGCTCTTCCTGAAGGACATCGGCAAGGTCGATCTCTTGACCGCCGCGCAGGAGGTCGAGCTCGCAAAGCGGATCGAGCGCGGCGACCACAGCGCGAAGCAGGAGATGGTCGAGGCGAACCTTCGCCTCGTCGTCTCGATCGCGAAGAAGTACCGCAACCAGGGCCTGCCCTTCCTCGATCTGATCCAGGAGGGGACGATCGGACTCGTCCGGGCTGCTGAGAAGTTCGACTACCGCAAAGGCTTCAAGTTCTCCACGTACGCGACGTGGTGGATCCGCCAGGCCGTTGCCCGCGCGCTGGCGGACAAGGCACGCACGATTCGCATGCCGGTGCACGTGGTGGAGAAGCTGAACAAGATCGTGCGGTCGGAGCGCAAGCTCCGGGCGGAGCTGGGCCGCGAGCCCAACGCCGCCGAGATTGGCCGCGACCTCGATCTAAGTCCGGAGGAGGTCGAGCACATCCGCCGCAGCGCGCAGACACCGGTCTCGCTCGAGAAGCCGGTCGGCGACGAGGACGAGTCGGAGTTCGGCCACTTCATCACCGACGAGAATCTGCCGCTGCGAGCGCATCCGGCAGATCGAGAACCAGAGCCTGAAGAAGCTGCGTGCCCTCGCGGACGCGATCAAGCTTCGCGACGTCGCGTAGCCAGATAG
PROTEIN sequence
Length: 308
VSATEAVAPPKTVVDLLETDDAKALLDAGKEHGQLSADEIAVALDELDLEPGQIDDFYHALEELHIEVVTGVEEEQEAVEEPREVSTDALQLFLKDIGKVDLLTAAQEVELAKRIERGDHSAKQEMVEANLRLVVSIAKKYRNQGLPFLDLIQEGTIGLVRAAEKFDYRKGFKFSTYATWWIRQAVARALADKARTIRMPVHVVEKLNKIVRSERKLRAELGREPNAAEIGRDLDLSPEEVEHIRRSAQTPVSLEKPVGDEDESEFGHFITDENLPLRAHPADREPEPEEAACPRGRDQASRRRVAR*