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PLM1_5_b1_sep16_scaffold_10662_2

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 327..872

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 modulation protein / SSU ribosomal protein S30P Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVJ5_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 190.0
  • Bit_score: 169
  • Evalue 1.70e-39
sigma 54 modulation protein/30S ribosomal protein S30P similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 190.0
  • Bit_score: 169
  • Evalue 4.70e-40
Tax=RBG_13_Actinobacteria_63_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 185.0
  • Bit_score: 176
  • Evalue 3.30e-41

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Taxonomy

RBG_13_Actinobacteria_63_9_curated → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGCGACTTCAGGTGAAGGGCAAGAACGTCGAGGTCAGTGACACGATTCGCCGCTACGCCGAGGAAAAGATGAGCAAGTTGAATCGCCAGCTGCACGACCTGGCAGAGGTGGAGCTCGAGCTACGCGTCGAGAAGAACCCCTCGATTGCCGACAACCAGGTTGCGGAAGTGACCGTCTGGACGAAGGGGCCGACGCTCCGCGTCACGGAAGCGTCGACCGACATGAAGGCATCGATCGACCAGTTGACCGAGAAGCTTCTGCGTCAGATCGAGCATGTCCGCGGCAAGCGAAAGGGCAGGCAGGTGCGTGGAAACGGCGACCCGTCGGGAGGTTCGATGAGCAGCCAAGACGAAGAGGAGACTGGCCCTCAGATCGTCAAGACCAAGCAGTTCACGATGAAGCCGATGAGCGCCGAAGAGGCCGCACTCCAGCTCGAGCTCATCGGTCACGACTTCTTCGTCTTTCGCAGCGAGGACTCCCTCGAGCTCAACGTCATCTATCGCCGCCGGAGCGGCGGTTACGGCGTGATCGAGCCCTCGGGTTAG
PROTEIN sequence
Length: 182
MRLQVKGKNVEVSDTIRRYAEEKMSKLNRQLHDLAEVELELRVEKNPSIADNQVAEVTVWTKGPTLRVTEASTDMKASIDQLTEKLLRQIEHVRGKRKGRQVRGNGDPSGGSMSSQDEEETGPQIVKTKQFTMKPMSAEEAALQLELIGHDFFVFRSEDSLELNVIYRRRSGGYGVIEPSG*