ggKbase home page

PLM1_5_b1_sep16_scaffold_17263_3

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(894..1601)

Top 3 Functional Annotations

Value Algorithm Source
RNA methyltransferase, TrmH family, group 3 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F143_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 236.0
  • Bit_score: 225
  • Evalue 4.40e-56
TrmH family RNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 236.0
  • Bit_score: 225
  • Evalue 1.20e-56
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 234.0
  • Bit_score: 355
  • Evalue 3.90e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGACGCGCGACCAGCTCTATGGACGCCGCCCGGTGCGGGAAGCGCTGCGCGGGCCACGGGAGGTGCTCGAGCTCTGGGCCACGGAGCGGGCGGTGAAGTCCGAGCCCTGGCTGAGCGAGGTCGAGCGTCCGAGGCTGCAGGTGAAGCCCGAGCGCGATCTGAGCGAAGCCGCGGGAACTCGTGACCACCAGGGCGTGGTCGCGTGGTGTGAGCCCTACAAGTACGCCGACGGCTGGGAGCTCGCAGCGGCAGAACGGCCGCTTCTAGCCTGCCTGGATCAGGTCACCGACCCGCGCAATCTCGGCGCGGTGATCCGAAGCGCAGAGGGAGCGGGGGCGACCGGCGTCGTCGTCCCGGCGCACGGCTCGGCAACGGTGACGCCCGCGGTCGCCCGCGCGTCGGCGGGTGCGATCGAGCATCTTCCGGTCGCAGTCGTCCCGAACCTCGCGCGCTACCTCGGCGAAGTGAAGCGAGGCGACTTCTGGATCTACGCAGCGACCGGTGACGCGAAGACGTCGCTGTGGGACGCCGACCTGACCGGTGGCGTCGCCCTCGTGTTCGGTGCCGAGGGCAAGGGACTGCGCCCGCTCGTGCGTAAGACGTGCGACGACGCGATCTCGATCCCGCTTGCCGGCAACGTCGAGTCGCTGAACGTCAGCGTCGCCGCTGCGCTGATGCTCTACGAAGCGAGACGGCAGCGTGGCTGA
PROTEIN sequence
Length: 236
MTRDQLYGRRPVREALRGPREVLELWATERAVKSEPWLSEVERPRLQVKPERDLSEAAGTRDHQGVVAWCEPYKYADGWELAAAERPLLACLDQVTDPRNLGAVIRSAEGAGATGVVVPAHGSATVTPAVARASAGAIEHLPVAVVPNLARYLGEVKRGDFWIYAATGDAKTSLWDADLTGGVALVFGAEGKGLRPLVRKTCDDAISIPLAGNVESLNVSVAAALMLYEARRQRG*