ggKbase home page

PLM1_5_coex_redo_sep16_scaffold_237_8

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(6013..7389)

Top 3 Functional Annotations

Value Algorithm Source
Putative amino acid transporter Tax=Gordonia rhizosphera NBRC 16068 RepID=K6V546_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 451.0
  • Bit_score: 598
  • Evalue 4.80e-168
Putative transmembrane permease protein {ECO:0000313|EMBL:CCH79713.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 458.0
  • Bit_score: 632
  • Evalue 2.50e-178
transmembrane permease protein similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 451.0
  • Bit_score: 583
  • Evalue 3.50e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tetrasphaera japonica → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1377
ATGGCCGGCGGTGCCCCGGTTGCCATGCTGCTCGGCAATGGTCCGGGAATCCCCCTGGCATATGTCGTGGTGAGTGTGATCTTGCTGATCTTTGCTGTTGGCTACACCGCGATGGCCCGCCACCACACCAGCACCGGAGCCTTCTACAGTTTCGTCACGCGCGGCTTGAGGCAACCGGCTGGCGGCGCCGCCGCGATGATTGCGTTGCTCGGCTACAACGCCATGCAGATCGGCCTGTATGGCTTGTTCGCCGCCGTCGCCGCTGGATTCTTCAGCGAGAATCTTGGTATCGACCTGCCGTGGTGGGTCTACGCACTCGTCGCGATGGCGATCATCGCGGTGCTGGGCTACCGACAAGTTGATCTTTCAGTCAAAGTACTGGCGATCTTGGTCAGCCTGGAGTTCCTGATCGTGCTCATCCTCGACGCCGCGATCTTGATTCAGGGCGGCCAGGGCGGCACCGCTCCGCTGACCGCCACCCCATTCACGTGGGCCAGTTTCACAACCGGCTCGATAGCCATCGCCCTGCTGTTCAACTTTGCGTCTTTCATTGGCTTCGAGGCCACCACGATCTACAGCGAGGAAGCCAAGGACCCCAAGCGCACAGTGCCACGGGCGACCTATGTAGCCGTCTTGACCATCGGCATCTTCTACACCCTCACCACCTACCTCATGGTCGAGGGCCAAGGGGCCGCAGGTTTGCAGGAGTACCTCGCCGGCCTCCAGCCTGATCCGACAGCATTCTTGTTCGTCCTTGGTACGACCTACATTGGCGCAGCGCTCACCACGGTGATGTCGCTGCTGTTCATCTCCAGCGTGTTCGCGGCCCTCTTGGCTTTCCACAACGCCGTGGCGCGGTACCTGTACGCTCTCGGCCGCGAAGGGCTCGTCCCGGAACGGCTCGGCCGCACCCACACCAAGTACCTCAGCCCATATGCCGGCTCGCTCAGCCAGTCGATCTTGGCCTTCGTCGTAGTACTGATCTTCGTGATCACTGGTCAAGACCCAGTCCTGGCATTGTTCACCTGGCTGACTCAGCTCGGCACCCTGGCGATCATCGTGTTGATGGCCCTGGCCTCATTTGCGGTTGTCGCGTTCTTCGCTGGCCACCGAGACCTCGACTCCAATGTGCTCCGCACAGTCGTGGCGCCGATCGTCGGCGGCGTGGCGATGACCGCTGTAGCCATCTACGCGGCTTCGCAATTTGGACTGCTGATCGGCAACCCGGAGAGCCCGCTGCGCTGGATCCTGCCCGCCTTGATCGTTGTCGCGGCGATCGGCGGAATCATCGCGGCGGTCAGTCTGAAGGGCCGCTCACCAGAGCTGTACGCCCAGATGGGCCGACACCGCGACATTGAGTTGCTGCCAGGTACGTAG
PROTEIN sequence
Length: 459
MAGGAPVAMLLGNGPGIPLAYVVVSVILLIFAVGYTAMARHHTSTGAFYSFVTRGLRQPAGGAAAMIALLGYNAMQIGLYGLFAAVAAGFFSENLGIDLPWWVYALVAMAIIAVLGYRQVDLSVKVLAILVSLEFLIVLILDAAILIQGGQGGTAPLTATPFTWASFTTGSIAIALLFNFASFIGFEATTIYSEEAKDPKRTVPRATYVAVLTIGIFYTLTTYLMVEGQGAAGLQEYLAGLQPDPTAFLFVLGTTYIGAALTTVMSLLFISSVFAALLAFHNAVARYLYALGREGLVPERLGRTHTKYLSPYAGSLSQSILAFVVVLIFVITGQDPVLALFTWLTQLGTLAIIVLMALASFAVVAFFAGHRDLDSNVLRTVVAPIVGGVAMTAVAIYAASQFGLLIGNPESPLRWILPALIVVAAIGGIIAAVSLKGRSPELYAQMGRHRDIELLPGT*