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PLM1_5_coex_redo_sep16_scaffold_2784_8

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(6162..6677)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, HxlR type Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SCF7_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 168.0
  • Bit_score: 304
  • Evalue 4.10e-80
helix-turn-helix, HxlR type similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 168.0
  • Bit_score: 304
  • Evalue 1.20e-80
Helix-turn-helix, HxlR type {ECO:0000313|EMBL:ABL79492.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 168.0
  • Bit_score: 304
  • Evalue 5.80e-80

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Taxonomy

Nocardioides sp. JS614 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 516
CGCCTCGGCGTTGTCGAGTCGGCACCCAAGGCTCAGGGGCGTGGTCACCGTTACCAGCTCACGAGCTCGGGCCACGATCTGTTCAAGGTCTGCCAGGTCCTCGGCGAGTGGGGAGCTCGGTGGCTCGAGATCGCCCCGGCGAACCTCGATCCGTTCGTGGCGCTGTGGTCCATGTGCAACGCTCTCCGCCGGGACCGACTTCCGGACCAGCGCGTTGTCATCCGGTTGGATTTCACCGGCTTCCGGCCCCACGAGCGGTACTGGTTGCTGTTCGAGCAGGGCGAGCCCGAGATCTGCAAGACGTATTCCGGTCTGGACGAAGATCTCTACATCACCGCCGACGCCGAGGCGTTCGTGAAGTGGCACGCCGGCCAGCTCTCCTGGGCGGAGGCAACCCGCGACTCCCGGATCCAGCTCCACGGTCCCTTATGGCTGGTACGGGCCTTCCCGAGCTGGAACGGCCGCAGCATGTTCGCCCACATCAAGCCCGACGCCGCCGCCGCCACCGCGAATTGA
PROTEIN sequence
Length: 172
RLGVVESAPKAQGRGHRYQLTSSGHDLFKVCQVLGEWGARWLEIAPANLDPFVALWSMCNALRRDRLPDQRVVIRLDFTGFRPHERYWLLFEQGEPEICKTYSGLDEDLYITADAEAFVKWHAGQLSWAEATRDSRIQLHGPLWLVRAFPSWNGRSMFAHIKPDAAAATAN*