ggKbase home page

PLM1_5_coex_redo_sep16_scaffold_527_3

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 1089..3962

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQC5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 970.0
  • Bit_score: 569
  • Evalue 3.80e-159
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 970.0
  • Bit_score: 569
  • Evalue 1.10e-159
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA28398.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 970.0
  • Bit_score: 569
  • Evalue 5.40e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2874
ATGCGCCAGTTGCTGTGTCCGGTCGTGGTCGGACGCGACGTGGAGCTGGCGATGATTGACTCGGCTCTCCGGCGGACCGCCGCCAGCCGAGGTGGAGTGGTGTTTGTCGTCGGCGAGGCCGGGCTGGGGAAGTCGCGTATCGCTCGCGCGGCGGAGGCGGCGGCCAGGGCAACAGACATGGCGGTGTTGACCGGGCGGGCGGTACGCGATGGCCAGACGAGCGCTTTTCGGGCGTTGTCGGAGGCGCTGCTGCGTGCTTCCCGGATCGCGGGACTGCCAGACAGCCCGGACCTCGGGCCGTTCCGCGGGTATCTGGCCCGCATCGTGCCGGAATGGCGCGCTGCGGCCGCACCGATAACCGAAGAAGGGGATGTCGGTCTCGCCGAAGGTGTGCTTCGGCTGCTCCGGCTGCTCGGGGGACGAAGCGGCTGCCTGCTCGTGCTCGAGGATCTGCACTGGGCCGACGCCGGGACACTCGCCGTCGTGGAGTACCTGGCCGACAACCTCGACGGCGAGCCGGTGGTGTGCCTGGTCACCGTACGCACCGGCGAGAACAGCCGCGGCGAAGAGCTCGTGCACCAGCTGGCCGCACGCCGCGTCGGCATGTTCGCGGAACTGTCGCCGCTCGATCAGGACGAGGTGGAAAGGATGGCTGCAGCGTGCCTGAACCAGCAGCATGTTTCGCCGGACGTTGGCCGACTGGTGCGGGATTGGGCTGGCGGCGTGCCGTTCTTGGTCGAGGAGATTCTCGCGACGCTCGCCGCGCGTGGGGTATTGCAGGCGAGCGGGGGTCACTGGACTGTTCGGGAAGCCCTGCCGCTGGTTGTACCGCTGAGCTTCACCCAATCGGTACAGGTACGTCTAGACGCGTTGGGTGAGGAGTGCCGTCAGCTGCTGCTGGCAGCAGCCGTACTTGGCCGACAGTTCGACTGGAACCTGCTGTCGTCTATGACGCTGCTTTCGGAGGATGTGGTCAGGGCCCATCTGCGGCGGGCCGTTGACGCCCAACTTCTCGTAGCCGATACGGGCTTTCGTTTTCGGCATGCGCTCACCCGCGAGGCCGTCCTGTTGGGAATGCTTCCACCGGACCGAACTTTGTTGTACGCCGAGGCCCTGGAATCCGTTGAGCAGGCGCATCCGGGACTGCCGGGTCAATGGTGCGACCTGGCCGCTGAGCTGGCGGAGCAGGCTGGCCACGACCGCCGGGCCACGGAGATTCTTTTGCTGGCCGGACGCCGCGCGCTGGGGACGGGATCGCTGGGCACAGCCGAGGCCGTTCTGGAACGGGCCCGGATCCGAGCAACCAATGCTGCTGCCGCCGATGATCAAACGATCGACATCGAGATCGACCGCGCCTTCACCGAAGTGTTGGCCCTTGCCGGAAAGGTTGATCGGGCCTTCGAAGTTGGGCGGTTGCTTCTGAGCCGCATGGATACCGTGTCCTCGGCCCCTGCAGCGCGAGCAGAGCTCCATCTGCTGCTGGCTCGGGCTGCTACGTCCGCTGGTGACTGGACGGCGGCGGCGGAGCATCTGGGTCAGGCGCGGGCGCTCGGCGAGCGTGCCGCCGCCCCGGAGGTGCTGGCCCGAGTGGATGCATTGGCCGCCCGAGGCGCCTTCAGCCAAGCGGAGGTGGAAACGGCGGTCGAGTACGCAGCGGCGGCACTGTCGGCTGCCGAGCAGTACGGCTGGCCGGACGTTTCCTGCCAGGCCCTCGAGATCCTCGGCTACCGAGCGCGGCGGCGCGACCTCGCTGAAGCCGAAGGCATCTTCGAGCGGGCTCGGCAAATCGCCGAACAGCATGGGCTTGAGCTATGGCGGGTCCGAGCCCTCTACGACCTCGGCAGCCTCGACGCGCTCAGTCGGCGCCGCGTCGACCGTTTGGTACAGGCTCGCGGCGCTGCGCTGCGTATCGGCGCACTGTCCACGGCTGCCGCTGTCGAGCTGACGCTCGCTTTGCTCATCTGCGGTGACCCGGGCCAGCTTGACGAGGCGCTGGCCATGGCACGCCGCAGCGTCGAAGCCTGCCGGCGGCTGCGGCTCGCCATGCTGCCCAAGGCCCTCCTCTGGCAGGCCGAACTCCTGGCCTACCAGCAGCGGCACGACGAGATGGAACTAGCCCTGACAGAAGCCATGATGCTGGCTCCCGACGATCCAGAGATCTGTGGCATAGCCTTCGGTCAGGTTCATGGCCTCTCATTCCTCCTTCAAGAGGAGCGCACCCAGGCTCTGTCCGCGATGGATCGCGGCATGGCGTTCATGCGCCGATCACCGGTGACCTCTCCTGCACCGTTCCACGGATTCTGGGCCCTGATCTGCACGATCGAGGACCATGACGGGCAAGGCGCCAGGTCAGAGGTCCGGGCATCCAGTGCTGCCGTACAGGCAATCGCTCGCGCGTGCCTGCGATACAGCGAGGCGATTGCCCTGGGGCGCGCCGGTCGTACGGAGGAGGCAACCGCCGCGGCAGAGGCCGCCACTGCCGACATGGCCGCCATGCAACACAGCGAGCTCTTCGCGGCGCTGGCCCTGCGGCTCGTCGCCGAGGCCGCGCTCCGCGACGGCTGGGGCGAACCGGTCGGCTGGCTCACGTCGTGCCAAGCCTTCTTTTCAGCGTCTGGATATCCAGCCGTCGCCGAGGCATGTGAGCGCCTCCTCAACCACAGGCGCCCAGCACGTCTGCCTGGCGGCCTGACCGAACGTGAGGCGCAGGTGCTACGCCTCGTCACCGACGGCCGCACCAACCGACAGATCGCCGCCGAACTGTTCTTGAGTGAGAAGACCGTAGCCCGGCACCTGTCCAATATCTTCGCCAAACTCGGCGTCGGCAGCCGCGCCGCGGCCACCGCGTTCGCCACCCGCGAGGGCATCGCCTAG
PROTEIN sequence
Length: 958
MRQLLCPVVVGRDVELAMIDSALRRTAASRGGVVFVVGEAGLGKSRIARAAEAAARATDMAVLTGRAVRDGQTSAFRALSEALLRASRIAGLPDSPDLGPFRGYLARIVPEWRAAAAPITEEGDVGLAEGVLRLLRLLGGRSGCLLVLEDLHWADAGTLAVVEYLADNLDGEPVVCLVTVRTGENSRGEELVHQLAARRVGMFAELSPLDQDEVERMAAACLNQQHVSPDVGRLVRDWAGGVPFLVEEILATLAARGVLQASGGHWTVREALPLVVPLSFTQSVQVRLDALGEECRQLLLAAAVLGRQFDWNLLSSMTLLSEDVVRAHLRRAVDAQLLVADTGFRFRHALTREAVLLGMLPPDRTLLYAEALESVEQAHPGLPGQWCDLAAELAEQAGHDRRATEILLLAGRRALGTGSLGTAEAVLERARIRATNAAAADDQTIDIEIDRAFTEVLALAGKVDRAFEVGRLLLSRMDTVSSAPAARAELHLLLARAATSAGDWTAAAEHLGQARALGERAAAPEVLARVDALAARGAFSQAEVETAVEYAAAALSAAEQYGWPDVSCQALEILGYRARRRDLAEAEGIFERARQIAEQHGLELWRVRALYDLGSLDALSRRRVDRLVQARGAALRIGALSTAAAVELTLALLICGDPGQLDEALAMARRSVEACRRLRLAMLPKALLWQAELLAYQQRHDEMELALTEAMMLAPDDPEICGIAFGQVHGLSFLLQEERTQALSAMDRGMAFMRRSPVTSPAPFHGFWALICTIEDHDGQGARSEVRASSAAVQAIARACLRYSEAIALGRAGRTEEATAAAEAATADMAAMQHSELFAALALRLVAEAALRDGWGEPVGWLTSCQAFFSASGYPAVAEACERLLNHRRPARLPGGLTEREAQVLRLVTDGRTNRQIAAELFLSEKTVARHLSNIFAKLGVGSRAAATAFATREGIA*