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PLM1_5_coex_redo_sep16_scaffold_16_18

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(15372..15920)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 168.0
  • Bit_score: 246
  • Evalue 1.50e-62
formylmethionine deformylase Tax=Actinoplanes globisporus RepID=UPI0003717F24 similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 173.0
  • Bit_score: 247
  • Evalue 8.30e-63
putative polypeptide deformylase similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 168.0
  • Bit_score: 241
  • Evalue 1.30e-61

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Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGCTGCCAACTCTGCCGGACGGCCGGGTGCTCGATGTGATCCGAGCCCCCAGCCAGGTGCTGTCGGTCGGCGGGTTGCCTGTCGATCCCGCCGACCCCGTGGTGGTCCAGCTCTGCGCCGATCTCGTTGCGACAATGCGCGTTTCTCCGGGCTGTGTGGGTCTCGCCGCGCCGCAGGTCGGGGAGTCGGTACAAGCCTTCTGTGTCGACGTCTCGGCCCATCCGAAGGCCCGGACCAGGCACGGGCTGATCGTGCTGGTGAACGCCGAAATCGTGGAGGCCAGCCGCAACGAGAAGGCTCGTGAGGGCTGCATGTCGGTGCCAGACATCACCGGGGACGTGAAGCGGGCGACCAAGATCACCGTGGCCGGTCTGCTGCCCCTTAGCGGCGAGCGGGTACTGATCACCACCGATGCCTTCGAGGCTCGGGCGCTACAGCATGAAATCGACCACTGCGACGGCAAGTTGTTCCTTGATCGCGTCATCGGCGCGCACGCCGTTCATCCGCGAAAGGTCTATCTGCAGCCGCGCGACTCTAGCGGCTCGTGA
PROTEIN sequence
Length: 183
MLPTLPDGRVLDVIRAPSQVLSVGGLPVDPADPVVVQLCADLVATMRVSPGCVGLAAPQVGESVQAFCVDVSAHPKARTRHGLIVLVNAEIVEASRNEKAREGCMSVPDITGDVKRATKITVAGLLPLSGERVLITTDAFEARALQHEIDHCDGKLFLDRVIGAHAVHPRKVYLQPRDSSGS*