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PLM1_5_coex_redo_sep16_scaffold_23_41

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 40057..40842

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter frateurii M-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 258.0
  • Bit_score: 290
  • Evalue 2.20e-75
Shikimate dehydrogenase Tax=Gluconobacter oxydans RepID=K7SFV2_GLUOY similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 258.0
  • Bit_score: 290
  • Evalue 1.60e-75
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 258.0
  • Bit_score: 290
  • Evalue 4.50e-76

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Taxonomy

Gluconobacter frateurii → Gluconobacter → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGATGGAGGCGGCCTACGCGCACCACAGCATCGACGCGCGATACGTGAATTGCGACGTGGCCGCCGCGGACCTGGCAGATGCGCTGCGCGGGGCGACGGCCATGGGCTGGATCGGCTTCAACTGCTCGTTACCGCACAAGGTGGCGGTGATCGAGCTGCTTAATGAGCTCGCCGAGTCGGCCCGTCTCATCGGCGCGGTGAATTGTGCGGTACGCCGCAATGACCGGTGGATCGGGGAGAACACCGACGGCCAAGGCTTCCTGGCCTCCTTGCGCACCGTGGCCGAACCGGCGGGACAGCGAGTCCTCATTCTCGGCGCTGGGGGGGCGGCACGCGCGATAGCTGTCGAGCTCGCACTTGCAGGAGCGGCTGAGGTATGGGTTGCCAATCGCAACCTCGCCAAGGCAGCCGAAATTGAAACCCTGGTGAACGATGAGACGTCAAGCGCCTGCACAGCCGTCGAGTGGCGGCAGGAGCTCACTGTGCCGGCGTCTGCCAACGTCGTGGTCAATGCCACATCGCTGGGCTTACCCGGTTCCGGGGAGGTGCCAGTTTCGTTCGATGTGATTCCGATGGACCTGGTGGTCTGCGACGTCATCCCGAATCCGCCCGACACCTCCTTCCTGCAGCGGGCCCGTCAGGCCGGCGCGACCACCCTCGATGGCCGTGGCATGCTGCTCAACCAAGGAGCGATCAACGTTGAGCTGTGGACCGGTGTCGACCCGGATCGTGAGGTGATGGGTCGAGCACTTGACGAGGCCATTGCGGGCTGGGCCCACCCGTAG
PROTEIN sequence
Length: 262
MMEAAYAHHSIDARYVNCDVAAADLADALRGATAMGWIGFNCSLPHKVAVIELLNELAESARLIGAVNCAVRRNDRWIGENTDGQGFLASLRTVAEPAGQRVLILGAGGAARAIAVELALAGAAEVWVANRNLAKAAEIETLVNDETSSACTAVEWRQELTVPASANVVVNATSLGLPGSGEVPVSFDVIPMDLVVCDVIPNPPDTSFLQRARQAGATTLDGRGMLLNQGAINVELWTGVDPDREVMGRALDEAIAGWAHP*