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PLM1_5_coex_redo_sep16_scaffold_74_28

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(25649..26314)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR Tax=Frankia sp. CN3 RepID=G6H4N6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 213.0
  • Bit_score: 152
  • Evalue 4.40e-34
Transcriptional regulator {ECO:0000313|EMBL:EXG82184.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 208.0
  • Bit_score: 213
  • Evalue 2.30e-52
HTH-type transcriptional regulator mtrR similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 202.0
  • Bit_score: 144
  • Evalue 2.00e-32

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGTCAGCCGACGCTCTTACCCGGAGGCCCAGAAGGGGCTACGCGTCGGCGGCACGTGCCGAGCAGGCGCGGCAGACACGCAGGCGAGTGATCGAAGCTGCGACTCGGCTGTTCGTCCAGCAGGGCTACACGACGACGACTATGCGGGCCATCGCCAGCGCGGCCGGCGTGTCCGTGCCGACGGTTGAGCTGCTGTTCGGTACCAAGGCACAACTACTACACGTCGTGATCGACGTGGCTATTGCCGGAGATGATGAGCCAGTACCGGTGCTGAAGCGAGCTTGGGCCGCCGATGCGCAATCGGCCCACAATGTCACCGATTTCCTGTCAGCCGTGGCGCAGGTGGTCAGCGATGCACAGTCTCGGTCTGCGGGGGTCATGCTTGCCGCGTACGAGGCGGCCGCGTCCGACCCAGACATCCATGTCTTGATCGCGGATCGGGAATCCCAACGGCAGCGCACCTCGAGCTGGATCGTCGACGGCGTCATGGCACGCACTGCGCTTCGCCCAGGAATTGACCGAACGAACGCCATCGACACCATCTGGTTGCTGATGGATCCAGTGATCTTCAGCCGCCTCACCCGCAGTCGAGCGTGGACCGCCGACCGCTATGCGTCATGGTTCGCCGATAGCGTCACCCAGTTGCTGACTTCAGACCGTCTTTAG
PROTEIN sequence
Length: 222
MSADALTRRPRRGYASAARAEQARQTRRRVIEAATRLFVQQGYTTTTMRAIASAAGVSVPTVELLFGTKAQLLHVVIDVAIAGDDEPVPVLKRAWAADAQSAHNVTDFLSAVAQVVSDAQSRSAGVMLAAYEAAASDPDIHVLIADRESQRQRTSSWIVDGVMARTALRPGIDRTNAIDTIWLLMDPVIFSRLTRSRAWTADRYASWFADSVTQLLTSDRL*