ggKbase home page

PLM1_5_coex_redo_sep16_scaffold_59_11

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(7622..8020)

Top 3 Functional Annotations

Value Algorithm Source
DNA binding domain protein, excisionase family Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PYC3_KRIFD similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 129.0
  • Bit_score: 169
  • Evalue 1.60e-39
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:CCH74491.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 135.0
  • Bit_score: 173
  • Evalue 1.60e-40
excisionase family DNA binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 129.0
  • Bit_score: 169
  • Evalue 4.50e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tetrasphaera australiensis → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 399
GTGCCGCATTACCGGATTGCTCAGGCCGCCTCGCTGCTTGGTGTCTCCGACGACACCGTACGGCGTTGGCTCGACTCGGGTCGGCTACGTGCTAGCAGCGCCAGCGGGCCCACCACCATCGACGGAGCCGAGCTCGCCGCACATGCGCAGGAGATCGCTACCGCACCGGAACTAGGAAGGCCGGTCGCGGAGAGCGCCCGAAACCGCTTTACCGGCCTGGTGACCCGCGTGATCAAGGATTCGGTGATGGCGCAGGTCGACCTGCAGTGCGGTCCATTCCGTGTCGTATCGCTGATATCAGCCGAGGCAGCGAGCGAACTCCAGCTCGAGCCCGGGGTGCTCGCGGTGGCCTCGGTCAAATCCACCCACGTCGTTGTAGAGGTCCCTGCGGTGCTATGA
PROTEIN sequence
Length: 133
VPHYRIAQAASLLGVSDDTVRRWLDSGRLRASSASGPTTIDGAELAAHAQEIATAPELGRPVAESARNRFTGLVTRVIKDSVMAQVDLQCGPFRVVSLISAEAASELQLEPGVLAVASVKSTHVVVEVPAVL*